Protein–RNA interactions for Protein: O75679

RFPL3, Ret finger protein-like 3, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3O75679 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RFPL3O75679 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RFPL3O75679 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.02■■□□□ 1.44
RFPL3O75679 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
RFPL3O75679 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RFPL3O75679 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RFPL3O75679 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RFPL3O75679 AC018755.3-202ENST00000596210 929 ntBASIC24.01■■□□□ 1.43
RFPL3O75679 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.01■■□□□ 1.43
RFPL3O75679 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.01■■□□□ 1.43
RFPL3O75679 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RFPL3O75679 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RFPL3O75679 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RFPL3O75679 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24■■□□□ 1.43
RFPL3O75679 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
RFPL3O75679 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
RFPL3O75679 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RFPL3O75679 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RFPL3O75679 AC103834.1-201ENST00000520383 144 ntBASIC23.98■■□□□ 1.43
RFPL3O75679 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.98■■□□□ 1.43
RFPL3O75679 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.97■■□□□ 1.43
RFPL3O75679 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.97■■□□□ 1.43
RFPL3O75679 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.97■■□□□ 1.43
RFPL3O75679 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RFPL3O75679 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RFPL3O75679 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.96■■□□□ 1.43
RFPL3O75679 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFPL3O75679 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFPL3O75679 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RFPL3O75679 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFPL3O75679 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.96■■□□□ 1.43
RFPL3O75679 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RFPL3O75679 AC131212.1-201ENST00000613771 668 ntBASIC23.96■■□□□ 1.43
RFPL3O75679 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
RFPL3O75679 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RFPL3O75679 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RFPL3O75679 PVT1_1.1-201ENST00000615125 194 ntBASIC23.94■■□□□ 1.42
RFPL3O75679 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RFPL3O75679 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
RFPL3O75679 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
RFPL3O75679 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.93■■□□□ 1.42
RFPL3O75679 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RFPL3O75679 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFPL3O75679 AC019069.1-201ENST00000610008 1333 ntBASIC23.92■■□□□ 1.42
RFPL3O75679 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFPL3O75679 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.92■■□□□ 1.42
RFPL3O75679 MIR4508-201ENST00000584178 70 ntBASIC23.92■■□□□ 1.42
RFPL3O75679 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RFPL3O75679 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFPL3O75679 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
RFPL3O75679 GUSBP5-201ENST00000418136 578 ntBASIC23.91■■□□□ 1.42
RFPL3O75679 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.91■■□□□ 1.42
RFPL3O75679 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.91■■□□□ 1.42
RFPL3O75679 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFPL3O75679 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RFPL3O75679 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.9■■□□□ 1.42
RFPL3O75679 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.9■■□□□ 1.42
RFPL3O75679 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RFPL3O75679 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.9■■□□□ 1.42
RFPL3O75679 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RFPL3O75679 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RFPL3O75679 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.89■■□□□ 1.41
RFPL3O75679 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.89■■□□□ 1.41
RFPL3O75679 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.89■■□□□ 1.41
RFPL3O75679 THA1P-201ENST00000590384 1145 ntBASIC23.89■■□□□ 1.41
RFPL3O75679 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
RFPL3O75679 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.88■■□□□ 1.41
RFPL3O75679 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RFPL3O75679 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RFPL3O75679 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFPL3O75679 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFPL3O75679 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFPL3O75679 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
RFPL3O75679 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFPL3O75679 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFPL3O75679 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
RFPL3O75679 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RFPL3O75679 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.86■■□□□ 1.41
RFPL3O75679 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.86■■□□□ 1.41
RFPL3O75679 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFPL3O75679 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.85■■□□□ 1.41
RFPL3O75679 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFPL3O75679 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFPL3O75679 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RFPL3O75679 AL031848.2-201ENST00000607670 837 ntBASIC23.85■■□□□ 1.41
RFPL3O75679 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFPL3O75679 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFPL3O75679 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.84■■□□□ 1.41
RFPL3O75679 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFPL3O75679 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
RFPL3O75679 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RFPL3O75679 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.84■■□□□ 1.41
RFPL3O75679 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFPL3O75679 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFPL3O75679 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RFPL3O75679 AP002414.2-202ENST00000590929 1450 ntBASIC23.83■■□□□ 1.41
RFPL3O75679 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RFPL3O75679 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.83■■□□□ 1.41
RFPL3O75679 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.83■■□□□ 1.41
RFPL3O75679 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms