Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGA12O60330 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
PCDHGA12O60330 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
PCDHGA12O60330 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDHGA12O60330 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGA12O60330 MIR3960-201ENST00000583311 91 ntBASIC24.35■■□□□ 1.49
PCDHGA12O60330 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGA12O60330 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGA12O60330 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGA12O60330 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PCDHGA12O60330 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGA12O60330 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
PCDHGA12O60330 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
PCDHGA12O60330 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PCDHGA12O60330 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PCDHGA12O60330 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGA12O60330 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGA12O60330 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.33■■□□□ 1.49
PCDHGA12O60330 SPCS2P3-201ENST00000500401 656 ntBASIC24.33■■□□□ 1.49
PCDHGA12O60330 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHGA12O60330 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.33■■□□□ 1.49
PCDHGA12O60330 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHGA12O60330 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGA12O60330 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGA12O60330 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGA12O60330 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGA12O60330 AC010980.1-201ENST00000587192 1142 ntBASIC24.32■■□□□ 1.48
PCDHGA12O60330 AC142086.6-201ENST00000621154 1765 ntBASIC24.31■■□□□ 1.48
PCDHGA12O60330 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
PCDHGA12O60330 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PCDHGA12O60330 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGA12O60330 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDHGA12O60330 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGA12O60330 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.31■■□□□ 1.48
PCDHGA12O60330 MIR6765-201ENST00000614092 87 ntBASIC24.31■■□□□ 1.48
PCDHGA12O60330 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHGA12O60330 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGA12O60330 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHGA12O60330 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGA12O60330 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGA12O60330 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHGA12O60330 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGA12O60330 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
PCDHGA12O60330 AL139393.2-201ENST00000608721 2025 ntBASIC24.28■■□□□ 1.48
PCDHGA12O60330 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHGA12O60330 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGA12O60330 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHGA12O60330 AC139795.1-202ENST00000500444 432 ntBASIC24.28■■□□□ 1.48
PCDHGA12O60330 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.28■■□□□ 1.48
PCDHGA12O60330 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGA12O60330 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGA12O60330 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
PCDHGA12O60330 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA12O60330 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDHGA12O60330 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.27■■□□□ 1.48
PCDHGA12O60330 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA12O60330 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA12O60330 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
PCDHGA12O60330 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
PCDHGA12O60330 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA12O60330 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA12O60330 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA12O60330 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA12O60330 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA12O60330 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA12O60330 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA12O60330 YBX1P4-201ENST00000392794 808 ntBASIC24.24■■□□□ 1.47
PCDHGA12O60330 AC018755.3-202ENST00000596210 929 ntBASIC24.24■■□□□ 1.47
PCDHGA12O60330 KRT8P33-201ENST00000508125 1423 ntBASIC24.24■■□□□ 1.47
PCDHGA12O60330 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.24■■□□□ 1.47
PCDHGA12O60330 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.23■■□□□ 1.47
PCDHGA12O60330 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.23■■□□□ 1.47
PCDHGA12O60330 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA12O60330 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA12O60330 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHGA12O60330 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA12O60330 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHGA12O60330 AC009299.2-201ENST00000482477 511 ntBASIC24.23■■□□□ 1.47
PCDHGA12O60330 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA12O60330 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA12O60330 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
PCDHGA12O60330 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGA12O60330 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGA12O60330 AP002414.2-202ENST00000590929 1450 ntBASIC24.22■■□□□ 1.47
PCDHGA12O60330 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGA12O60330 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHGA12O60330 AC103834.1-201ENST00000520383 144 ntBASIC24.22■■□□□ 1.47
PCDHGA12O60330 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHGA12O60330 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDHGA12O60330 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHGA12O60330 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGA12O60330 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGA12O60330 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
PCDHGA12O60330 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
PCDHGA12O60330 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDHGA12O60330 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGA12O60330 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGA12O60330 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
PCDHGA12O60330 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHGA12O60330 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms