Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA1O15239 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA1O15239 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NDUFA1O15239 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA1O15239 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
NDUFA1O15239 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NDUFA1O15239 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.66■□□□□ 0.26
NDUFA1O15239 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NDUFA1O15239 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NDUFA1O15239 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.66■□□□□ 0.26
NDUFA1O15239 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NDUFA1O15239 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA1O15239 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.65■□□□□ 0.26
NDUFA1O15239 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA1O15239 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA1O15239 DUX4L28-201ENST00000623687 678 ntBASIC16.65■□□□□ 0.26
NDUFA1O15239 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.65■□□□□ 0.26
NDUFA1O15239 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA1O15239 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA1O15239 LINC00273-201ENST00000539813 1452 ntBASIC16.65■□□□□ 0.26
NDUFA1O15239 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDUFA1O15239 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NDUFA1O15239 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA1O15239 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.64■□□□□ 0.25
NDUFA1O15239 AP006261.1-201ENST00000584783 668 ntBASIC16.64■□□□□ 0.25
NDUFA1O15239 MIR6090-201ENST00000622481 60 ntBASIC16.64■□□□□ 0.25
NDUFA1O15239 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA1O15239 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA1O15239 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA1O15239 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDUFA1O15239 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA1O15239 WHAMMP2-203ENST00000563942 1603 ntBASIC16.63■□□□□ 0.25
NDUFA1O15239 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.63■□□□□ 0.25
NDUFA1O15239 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NDUFA1O15239 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.63■□□□□ 0.25
NDUFA1O15239 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA1O15239 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDUFA1O15239 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFA1O15239 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NDUFA1O15239 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NDUFA1O15239 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NDUFA1O15239 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NDUFA1O15239 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDUFA1O15239 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.61■□□□□ 0.25
NDUFA1O15239 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NDUFA1O15239 AC142381.3-201ENST00000568208 1670 ntBASIC16.61■□□□□ 0.25
NDUFA1O15239 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NDUFA1O15239 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NDUFA1O15239 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NDUFA1O15239 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDUFA1O15239 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDUFA1O15239 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDUFA1O15239 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NDUFA1O15239 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDUFA1O15239 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDUFA1O15239 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDUFA1O15239 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.6■□□□□ 0.25
NDUFA1O15239 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFA1O15239 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFA1O15239 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.59■□□□□ 0.25
NDUFA1O15239 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFA1O15239 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFA1O15239 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.59■□□□□ 0.25
NDUFA1O15239 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.59■□□□□ 0.25
NDUFA1O15239 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NDUFA1O15239 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
NDUFA1O15239 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
NDUFA1O15239 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NDUFA1O15239 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NDUFA1O15239 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFA1O15239 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFA1O15239 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFA1O15239 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFA1O15239 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFA1O15239 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFA1O15239 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFA1O15239 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFA1O15239 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFA1O15239 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFA1O15239 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.56■□□□□ 0.24
NDUFA1O15239 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFA1O15239 AC142472.1-201ENST00000612013 1741 ntBASIC16.56■□□□□ 0.24
NDUFA1O15239 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFA1O15239 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFA1O15239 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.55■□□□□ 0.24
NDUFA1O15239 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFA1O15239 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFA1O15239 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.55■□□□□ 0.24
NDUFA1O15239 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NDUFA1O15239 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA1O15239 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA1O15239 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.54■□□□□ 0.24
NDUFA1O15239 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA1O15239 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NDUFA1O15239 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
NDUFA1O15239 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.54■□□□□ 0.24
NDUFA1O15239 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.54■□□□□ 0.24
NDUFA1O15239 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDUFA1O15239 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.54■□□□□ 0.24
NDUFA1O15239 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms