Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
AP3D1O14617 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
AP3D1O14617 HLA-V-202ENST00000446817 847 ntBASIC22.73■■□□□ 1.23
AP3D1O14617 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
AP3D1O14617 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
AP3D1O14617 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
AP3D1O14617 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
AP3D1O14617 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.72■■□□□ 1.23
AP3D1O14617 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
AP3D1O14617 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.72■■□□□ 1.23
AP3D1O14617 AC145676.1-201ENST00000514988 2004 ntBASIC22.72■■□□□ 1.23
AP3D1O14617 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
AP3D1O14617 AC142472.1-201ENST00000612013 1741 ntBASIC22.71■■□□□ 1.23
AP3D1O14617 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
AP3D1O14617 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.71■■□□□ 1.23
AP3D1O14617 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
AP3D1O14617 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
AP3D1O14617 AC008813.1-201ENST00000536597 885 ntBASIC22.71■■□□□ 1.23
AP3D1O14617 MIR3648-2-201ENST00000581792 180 ntBASIC22.71■■□□□ 1.23
AP3D1O14617 MIR3648-1-201ENST00000615959 180 ntBASIC22.71■■□□□ 1.23
AP3D1O14617 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
AP3D1O14617 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
AP3D1O14617 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.71■■□□□ 1.23
AP3D1O14617 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
AP3D1O14617 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
AP3D1O14617 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
AP3D1O14617 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
AP3D1O14617 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
AP3D1O14617 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
AP3D1O14617 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
AP3D1O14617 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
AP3D1O14617 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
AP3D1O14617 MIR7108-201ENST00000614319 87 ntBASIC22.69■■□□□ 1.22
AP3D1O14617 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.69■■□□□ 1.22
AP3D1O14617 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
AP3D1O14617 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.68■■□□□ 1.22
AP3D1O14617 MIR219A2-201ENST00000608502 1504 ntBASIC22.68■■□□□ 1.22
AP3D1O14617 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.68■■□□□ 1.22
AP3D1O14617 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.68■■□□□ 1.22
AP3D1O14617 AC016575.1-201ENST00000607026 382 ntBASIC22.68■■□□□ 1.22
AP3D1O14617 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.67■■□□□ 1.22
AP3D1O14617 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.67■■□□□ 1.22
AP3D1O14617 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
AP3D1O14617 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
AP3D1O14617 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
AP3D1O14617 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
AP3D1O14617 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
AP3D1O14617 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.66■■□□□ 1.22
AP3D1O14617 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.66■■□□□ 1.22
AP3D1O14617 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.66■■□□□ 1.22
AP3D1O14617 AC148477.6-201ENST00000623746 465 ntBASIC22.66■■□□□ 1.22
AP3D1O14617 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
AP3D1O14617 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
AP3D1O14617 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
AP3D1O14617 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
AP3D1O14617 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
AP3D1O14617 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
AP3D1O14617 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
AP3D1O14617 AC092803.2-201ENST00000564287 1899 ntBASIC22.65■■□□□ 1.22
AP3D1O14617 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.65■■□□□ 1.22
AP3D1O14617 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
AP3D1O14617 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
AP3D1O14617 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.65■■□□□ 1.22
AP3D1O14617 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
AP3D1O14617 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
AP3D1O14617 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.64■■□□□ 1.21
AP3D1O14617 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
AP3D1O14617 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
AP3D1O14617 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.63■■□□□ 1.21
AP3D1O14617 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
AP3D1O14617 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
AP3D1O14617 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.63■■□□□ 1.21
AP3D1O14617 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
AP3D1O14617 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.62■■□□□ 1.21
AP3D1O14617 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.62■■□□□ 1.21
AP3D1O14617 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.62■■□□□ 1.21
AP3D1O14617 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
AP3D1O14617 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
AP3D1O14617 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
AP3D1O14617 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
AP3D1O14617 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
AP3D1O14617 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
AP3D1O14617 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.6■■□□□ 1.21
AP3D1O14617 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
AP3D1O14617 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
AP3D1O14617 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
AP3D1O14617 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
AP3D1O14617 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.6■■□□□ 1.21
AP3D1O14617 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
AP3D1O14617 DUSP8P4-201ENST00000399538 1761 ntBASIC22.59■■□□□ 1.21
AP3D1O14617 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
AP3D1O14617 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.59■■□□□ 1.21
AP3D1O14617 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
AP3D1O14617 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
AP3D1O14617 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.59■■□□□ 1.21
AP3D1O14617 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
AP3D1O14617 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
AP3D1O14617 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
AP3D1O14617 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
AP3D1O14617 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms