Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.71■■□□□ 1.23
KPNA4O00629 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.71■■□□□ 1.23
KPNA4O00629 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
KPNA4O00629 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
KPNA4O00629 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
KPNA4O00629 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.7■■□□□ 1.22
KPNA4O00629 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
KPNA4O00629 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
KPNA4O00629 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
KPNA4O00629 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.69■■□□□ 1.22
KPNA4O00629 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.69■■□□□ 1.22
KPNA4O00629 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
KPNA4O00629 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
KPNA4O00629 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.68■■□□□ 1.22
KPNA4O00629 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
KPNA4O00629 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.68■■□□□ 1.22
KPNA4O00629 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
KPNA4O00629 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.68■■□□□ 1.22
KPNA4O00629 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KPNA4O00629 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.67■■□□□ 1.22
KPNA4O00629 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
KPNA4O00629 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
KPNA4O00629 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.66■■□□□ 1.22
KPNA4O00629 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.66■■□□□ 1.22
KPNA4O00629 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
KPNA4O00629 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
KPNA4O00629 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KPNA4O00629 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
KPNA4O00629 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.65■■□□□ 1.22
KPNA4O00629 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.65■■□□□ 1.22
KPNA4O00629 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.65■■□□□ 1.22
KPNA4O00629 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KPNA4O00629 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KPNA4O00629 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
KPNA4O00629 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.64■■□□□ 1.21
KPNA4O00629 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.63■■□□□ 1.21
KPNA4O00629 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
KPNA4O00629 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.63■■□□□ 1.21
KPNA4O00629 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.63■■□□□ 1.21
KPNA4O00629 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
KPNA4O00629 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KPNA4O00629 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KPNA4O00629 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KPNA4O00629 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KPNA4O00629 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KPNA4O00629 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.61■■□□□ 1.21
KPNA4O00629 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KPNA4O00629 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
KPNA4O00629 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
KPNA4O00629 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KPNA4O00629 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KPNA4O00629 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KPNA4O00629 AP004609.3-201ENST00000610705 1884 ntBASIC22.6■■□□□ 1.21
KPNA4O00629 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.59■■□□□ 1.21
KPNA4O00629 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KPNA4O00629 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
KPNA4O00629 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
KPNA4O00629 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.59■■□□□ 1.21
KPNA4O00629 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.59■■□□□ 1.21
KPNA4O00629 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KPNA4O00629 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
KPNA4O00629 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KPNA4O00629 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KPNA4O00629 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.58■■□□□ 1.21
KPNA4O00629 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
KPNA4O00629 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
KPNA4O00629 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.57■■□□□ 1.2
KPNA4O00629 LINC01971-201ENST00000617888 1048 ntBASIC22.57■■□□□ 1.2
KPNA4O00629 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.57■■□□□ 1.2
KPNA4O00629 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KPNA4O00629 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
KPNA4O00629 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KPNA4O00629 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.56■■□□□ 1.2
KPNA4O00629 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
KPNA4O00629 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KPNA4O00629 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
KPNA4O00629 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
KPNA4O00629 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KPNA4O00629 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KPNA4O00629 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KPNA4O00629 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KPNA4O00629 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KPNA4O00629 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KPNA4O00629 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
KPNA4O00629 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.54■■□□□ 1.2
KPNA4O00629 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KPNA4O00629 AC145676.1-201ENST00000514988 2004 ntBASIC22.53■■□□□ 1.2
KPNA4O00629 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
KPNA4O00629 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.53■■□□□ 1.2
KPNA4O00629 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
KPNA4O00629 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
KPNA4O00629 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
KPNA4O00629 WHAMMP3-201ENST00000611636 1609 ntBASIC22.53■■□□□ 1.2
KPNA4O00629 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
KPNA4O00629 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
KPNA4O00629 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KPNA4O00629 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
KPNA4O00629 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KPNA4O00629 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
KPNA4O00629 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms