Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFA4O00483 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFA4O00483 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFA4O00483 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFA4O00483 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFA4O00483 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.85■□□□□ 0.61
NDUFA4O00483 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NDUFA4O00483 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.85■□□□□ 0.61
NDUFA4O00483 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
NDUFA4O00483 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.84■□□□□ 0.61
NDUFA4O00483 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.84■□□□□ 0.61
NDUFA4O00483 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.84■□□□□ 0.61
NDUFA4O00483 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFA4O00483 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
NDUFA4O00483 MIR4449-201ENST00000578365 66 ntBASIC18.84■□□□□ 0.61
NDUFA4O00483 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.84■□□□□ 0.61
NDUFA4O00483 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFA4O00483 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFA4O00483 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NDUFA4O00483 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.83■□□□□ 0.61
NDUFA4O00483 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NDUFA4O00483 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.83■□□□□ 0.6
NDUFA4O00483 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.83■□□□□ 0.6
NDUFA4O00483 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.83■□□□□ 0.6
NDUFA4O00483 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NDUFA4O00483 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NDUFA4O00483 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFA4O00483 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NDUFA4O00483 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NDUFA4O00483 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.81■□□□□ 0.6
NDUFA4O00483 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.81■□□□□ 0.6
NDUFA4O00483 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFA4O00483 AL359504.2-201ENST00000605506 1601 ntBASIC18.81■□□□□ 0.6
NDUFA4O00483 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NDUFA4O00483 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.8■□□□□ 0.6
NDUFA4O00483 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NDUFA4O00483 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.8■□□□□ 0.6
NDUFA4O00483 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.8■□□□□ 0.6
NDUFA4O00483 AC060814.1-201ENST00000554326 538 ntBASIC18.8■□□□□ 0.6
NDUFA4O00483 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFA4O00483 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFA4O00483 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
NDUFA4O00483 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFA4O00483 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFA4O00483 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFA4O00483 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDUFA4O00483 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.79■□□□□ 0.6
NDUFA4O00483 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFA4O00483 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFA4O00483 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFA4O00483 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
NDUFA4O00483 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFA4O00483 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFA4O00483 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFA4O00483 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFA4O00483 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFA4O00483 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDUFA4O00483 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.78■□□□□ 0.6
NDUFA4O00483 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFA4O00483 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFA4O00483 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NDUFA4O00483 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFA4O00483 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFA4O00483 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFA4O00483 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFA4O00483 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
NDUFA4O00483 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFA4O00483 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFA4O00483 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFA4O00483 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDUFA4O00483 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.77■□□□□ 0.59
NDUFA4O00483 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NDUFA4O00483 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDUFA4O00483 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDUFA4O00483 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NDUFA4O00483 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDUFA4O00483 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.75■□□□□ 0.59
NDUFA4O00483 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NDUFA4O00483 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NDUFA4O00483 AC022413.1-201ENST00000624602 984 ntBASIC18.75■□□□□ 0.59
NDUFA4O00483 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDUFA4O00483 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDUFA4O00483 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.74■□□□□ 0.59
NDUFA4O00483 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFA4O00483 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.74■□□□□ 0.59
NDUFA4O00483 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFA4O00483 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFA4O00483 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFA4O00483 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFA4O00483 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.74■□□□□ 0.59
NDUFA4O00483 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDUFA4O00483 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDUFA4O00483 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDUFA4O00483 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDUFA4O00483 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDUFA4O00483 AL157400.5-201ENST00000507624 621 ntBASIC18.73■□□□□ 0.59
NDUFA4O00483 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NDUFA4O00483 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.73■□□□□ 0.59
NDUFA4O00483 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDUFA4O00483 AC091060.1-201ENST00000623524 1766 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms