Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.08■■□□□ 1.29
CLIC1O00299 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CLIC1O00299 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLIC1O00299 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CLIC1O00299 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.07■■□□□ 1.28
CLIC1O00299 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.07■■□□□ 1.28
CLIC1O00299 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLIC1O00299 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLIC1O00299 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLIC1O00299 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLIC1O00299 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLIC1O00299 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CLIC1O00299 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLIC1O00299 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLIC1O00299 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.05■■□□□ 1.28
CLIC1O00299 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLIC1O00299 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CLIC1O00299 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLIC1O00299 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.05■■□□□ 1.28
CLIC1O00299 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CLIC1O00299 LINC01971-201ENST00000617888 1048 ntBASIC23.04■■□□□ 1.28
CLIC1O00299 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLIC1O00299 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLIC1O00299 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CLIC1O00299 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLIC1O00299 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.03■■□□□ 1.28
CLIC1O00299 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CLIC1O00299 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLIC1O00299 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.02■■□□□ 1.28
CLIC1O00299 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.02■■□□□ 1.28
CLIC1O00299 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLIC1O00299 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLIC1O00299 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.02■■□□□ 1.28
CLIC1O00299 ERN1-208ENST00000606895 2068 ntBASIC23.02■■□□□ 1.28
CLIC1O00299 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.01■■□□□ 1.27
CLIC1O00299 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLIC1O00299 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLIC1O00299 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLIC1O00299 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLIC1O00299 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLIC1O00299 AC010501.1-201ENST00000606270 1962 ntBASIC23.01■■□□□ 1.27
CLIC1O00299 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLIC1O00299 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLIC1O00299 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLIC1O00299 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLIC1O00299 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
CLIC1O00299 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23■■□□□ 1.27
CLIC1O00299 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23■■□□□ 1.27
CLIC1O00299 DUX4L13-201ENST00000554103 1267 ntBASIC23■■□□□ 1.27
CLIC1O00299 DUX4L15-201ENST00000611059 1267 ntBASIC23■■□□□ 1.27
CLIC1O00299 DUX4L23-201ENST00000615195 1269 ntBASIC23■■□□□ 1.27
CLIC1O00299 DUX4L24-201ENST00000617576 1269 ntBASIC23■■□□□ 1.27
CLIC1O00299 DUX4L22-201ENST00000618238 1269 ntBASIC23■■□□□ 1.27
CLIC1O00299 DUX4L20-201ENST00000619712 1269 ntBASIC23■■□□□ 1.27
CLIC1O00299 DUX4L21-201ENST00000622058 1269 ntBASIC23■■□□□ 1.27
CLIC1O00299 DUX4L10-201ENST00000622460 1267 ntBASIC23■■□□□ 1.27
CLIC1O00299 DUX4L25-201ENST00000624915 1269 ntBASIC23■■□□□ 1.27
CLIC1O00299 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLIC1O00299 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23■■□□□ 1.27
CLIC1O00299 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLIC1O00299 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLIC1O00299 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLIC1O00299 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CLIC1O00299 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLIC1O00299 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CLIC1O00299 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.99■■□□□ 1.27
CLIC1O00299 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLIC1O00299 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CLIC1O00299 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.98■■□□□ 1.27
CLIC1O00299 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.98■■□□□ 1.27
CLIC1O00299 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.97■■□□□ 1.27
CLIC1O00299 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLIC1O00299 RPS2P35-201ENST00000443417 897 ntBASIC22.97■■□□□ 1.27
CLIC1O00299 AC008813.1-201ENST00000536597 885 ntBASIC22.97■■□□□ 1.27
CLIC1O00299 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLIC1O00299 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.96■■□□□ 1.27
CLIC1O00299 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC1O00299 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC1O00299 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC1O00299 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC1O00299 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CLIC1O00299 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLIC1O00299 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CLIC1O00299 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLIC1O00299 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLIC1O00299 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLIC1O00299 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.95■■□□□ 1.26
CLIC1O00299 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
CLIC1O00299 MIR219A2-201ENST00000608502 1504 ntBASIC22.95■■□□□ 1.26
CLIC1O00299 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLIC1O00299 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CLIC1O00299 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLIC1O00299 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
CLIC1O00299 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CLIC1O00299 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.94■■□□□ 1.26
CLIC1O00299 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.94■■□□□ 1.26
CLIC1O00299 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
CLIC1O00299 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
CLIC1O00299 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CLIC1O00299 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms