Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3D21A4FU49 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
SH3D21A4FU49 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
SH3D21A4FU49 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SH3D21A4FU49 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.64■■□□□ 1.21
SH3D21A4FU49 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SH3D21A4FU49 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SH3D21A4FU49 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
SH3D21A4FU49 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SH3D21A4FU49 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SH3D21A4FU49 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.63■■□□□ 1.21
SH3D21A4FU49 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SH3D21A4FU49 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SH3D21A4FU49 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
SH3D21A4FU49 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
SH3D21A4FU49 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SH3D21A4FU49 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.62■■□□□ 1.21
SH3D21A4FU49 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SH3D21A4FU49 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SH3D21A4FU49 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
SH3D21A4FU49 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SH3D21A4FU49 AC092803.2-201ENST00000564287 1899 ntBASIC22.61■■□□□ 1.21
SH3D21A4FU49 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.61■■□□□ 1.21
SH3D21A4FU49 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.61■■□□□ 1.21
SH3D21A4FU49 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SH3D21A4FU49 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SH3D21A4FU49 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SH3D21A4FU49 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
SH3D21A4FU49 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SH3D21A4FU49 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.6■■□□□ 1.21
SH3D21A4FU49 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SH3D21A4FU49 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.6■■□□□ 1.21
SH3D21A4FU49 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SH3D21A4FU49 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
SH3D21A4FU49 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.59■■□□□ 1.21
SH3D21A4FU49 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SH3D21A4FU49 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SH3D21A4FU49 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
SH3D21A4FU49 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SH3D21A4FU49 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SH3D21A4FU49 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SH3D21A4FU49 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.58■■□□□ 1.21
SH3D21A4FU49 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
SH3D21A4FU49 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
SH3D21A4FU49 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.57■■□□□ 1.2
SH3D21A4FU49 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SH3D21A4FU49 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SH3D21A4FU49 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.55■■□□□ 1.2
SH3D21A4FU49 AC093323.1-202ENST00000635031 2045 ntBASIC22.55■■□□□ 1.2
SH3D21A4FU49 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.55■■□□□ 1.2
SH3D21A4FU49 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SH3D21A4FU49 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.55■■□□□ 1.2
SH3D21A4FU49 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SH3D21A4FU49 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SH3D21A4FU49 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SH3D21A4FU49 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3D21A4FU49 WHAMMP2-203ENST00000563942 1603 ntBASIC22.54■■□□□ 1.2
SH3D21A4FU49 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SH3D21A4FU49 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SH3D21A4FU49 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SH3D21A4FU49 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.54■■□□□ 1.2
SH3D21A4FU49 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SH3D21A4FU49 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SH3D21A4FU49 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
SH3D21A4FU49 AC135983.2-203ENST00000454486 1613 ntBASIC22.53■■□□□ 1.2
SH3D21A4FU49 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SH3D21A4FU49 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
SH3D21A4FU49 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SH3D21A4FU49 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
SH3D21A4FU49 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.53■■□□□ 1.2
SH3D21A4FU49 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SH3D21A4FU49 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SH3D21A4FU49 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SH3D21A4FU49 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SH3D21A4FU49 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.52■■□□□ 1.2
SH3D21A4FU49 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SH3D21A4FU49 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH3D21A4FU49 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH3D21A4FU49 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH3D21A4FU49 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH3D21A4FU49 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SH3D21A4FU49 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.5■■□□□ 1.19
SH3D21A4FU49 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH3D21A4FU49 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH3D21A4FU49 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH3D21A4FU49 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH3D21A4FU49 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SH3D21A4FU49 GPX1-201ENST00000419349 1106 ntBASIC22.49■■□□□ 1.19
SH3D21A4FU49 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.49■■□□□ 1.19
SH3D21A4FU49 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SH3D21A4FU49 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH3D21A4FU49 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
SH3D21A4FU49 RARRES2P2-201ENST00000394842 485 ntBASIC22.48■■□□□ 1.19
SH3D21A4FU49 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SH3D21A4FU49 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SH3D21A4FU49 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.48■■□□□ 1.19
SH3D21A4FU49 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.47■■□□□ 1.19
SH3D21A4FU49 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SH3D21A4FU49 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.47■■□□□ 1.19
SH3D21A4FU49 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms