Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TCRBV9S1A1TA0A576 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.71■■□□□ 1.55
TCRBV9S1A1TA0A576 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TCRBV9S1A1TA0A576 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TCRBV9S1A1TA0A576 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TCRBV9S1A1TA0A576 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
TCRBV9S1A1TA0A576 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.7■■□□□ 1.54
TCRBV9S1A1TA0A576 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.7■■□□□ 1.54
TCRBV9S1A1TA0A576 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.7■■□□□ 1.54
TCRBV9S1A1TA0A576 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.7■■□□□ 1.54
TCRBV9S1A1TA0A576 ERN1-208ENST00000606895 2068 ntBASIC24.7■■□□□ 1.54
TCRBV9S1A1TA0A576 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TCRBV9S1A1TA0A576 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.69■■□□□ 1.54
TCRBV9S1A1TA0A576 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.69■■□□□ 1.54
TCRBV9S1A1TA0A576 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TCRBV9S1A1TA0A576 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TCRBV9S1A1TA0A576 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TCRBV9S1A1TA0A576 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.68■■□□□ 1.54
TCRBV9S1A1TA0A576 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TCRBV9S1A1TA0A576 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.67■■□□□ 1.54
TCRBV9S1A1TA0A576 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TCRBV9S1A1TA0A576 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TCRBV9S1A1TA0A576 AC010501.1-201ENST00000606270 1962 ntBASIC24.67■■□□□ 1.54
TCRBV9S1A1TA0A576 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
TCRBV9S1A1TA0A576 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TCRBV9S1A1TA0A576 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.66■■□□□ 1.54
TCRBV9S1A1TA0A576 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TCRBV9S1A1TA0A576 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TCRBV9S1A1TA0A576 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TCRBV9S1A1TA0A576 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TCRBV9S1A1TA0A576 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TCRBV9S1A1TA0A576 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.65■■□□□ 1.54
TCRBV9S1A1TA0A576 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TCRBV9S1A1TA0A576 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TCRBV9S1A1TA0A576 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
TCRBV9S1A1TA0A576 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TCRBV9S1A1TA0A576 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TCRBV9S1A1TA0A576 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.64■■□□□ 1.54
TCRBV9S1A1TA0A576 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
TCRBV9S1A1TA0A576 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.64■■□□□ 1.54
TCRBV9S1A1TA0A576 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.64■■□□□ 1.53
TCRBV9S1A1TA0A576 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.63■■□□□ 1.53
TCRBV9S1A1TA0A576 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
TCRBV9S1A1TA0A576 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.63■■□□□ 1.53
TCRBV9S1A1TA0A576 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TCRBV9S1A1TA0A576 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
TCRBV9S1A1TA0A576 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TCRBV9S1A1TA0A576 LINC01971-201ENST00000617888 1048 ntBASIC24.62■■□□□ 1.53
TCRBV9S1A1TA0A576 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TCRBV9S1A1TA0A576 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TCRBV9S1A1TA0A576 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TCRBV9S1A1TA0A576 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.61■■□□□ 1.53
TCRBV9S1A1TA0A576 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
TCRBV9S1A1TA0A576 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
TCRBV9S1A1TA0A576 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
TCRBV9S1A1TA0A576 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TCRBV9S1A1TA0A576 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TCRBV9S1A1TA0A576 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.6■■□□□ 1.53
TCRBV9S1A1TA0A576 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TCRBV9S1A1TA0A576 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.59■■□□□ 1.53
TCRBV9S1A1TA0A576 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TCRBV9S1A1TA0A576 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
TCRBV9S1A1TA0A576 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
TCRBV9S1A1TA0A576 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
TCRBV9S1A1TA0A576 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
TCRBV9S1A1TA0A576 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TCRBV9S1A1TA0A576 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TCRBV9S1A1TA0A576 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.58■■□□□ 1.53
TCRBV9S1A1TA0A576 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TCRBV9S1A1TA0A576 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
TCRBV9S1A1TA0A576 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TCRBV9S1A1TA0A576 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TCRBV9S1A1TA0A576 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.57■■□□□ 1.52
TCRBV9S1A1TA0A576 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TCRBV9S1A1TA0A576 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TCRBV9S1A1TA0A576 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.56■■□□□ 1.52
TCRBV9S1A1TA0A576 DUX4L13-201ENST00000554103 1267 ntBASIC24.56■■□□□ 1.52
TCRBV9S1A1TA0A576 DUX4L15-201ENST00000611059 1267 ntBASIC24.56■■□□□ 1.52
TCRBV9S1A1TA0A576 DUX4L23-201ENST00000615195 1269 ntBASIC24.56■■□□□ 1.52
TCRBV9S1A1TA0A576 DUX4L24-201ENST00000617576 1269 ntBASIC24.56■■□□□ 1.52
TCRBV9S1A1TA0A576 DUX4L22-201ENST00000618238 1269 ntBASIC24.56■■□□□ 1.52
TCRBV9S1A1TA0A576 DUX4L20-201ENST00000619712 1269 ntBASIC24.56■■□□□ 1.52
TCRBV9S1A1TA0A576 DUX4L21-201ENST00000622058 1269 ntBASIC24.56■■□□□ 1.52
TCRBV9S1A1TA0A576 DUX4L10-201ENST00000622460 1267 ntBASIC24.56■■□□□ 1.52
TCRBV9S1A1TA0A576 DUX4L25-201ENST00000624915 1269 ntBASIC24.56■■□□□ 1.52
TCRBV9S1A1TA0A576 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.56■■□□□ 1.52
TCRBV9S1A1TA0A576 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TCRBV9S1A1TA0A576 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
TCRBV9S1A1TA0A576 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
TCRBV9S1A1TA0A576 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TCRBV9S1A1TA0A576 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.55■■□□□ 1.52
TCRBV9S1A1TA0A576 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
TCRBV9S1A1TA0A576 AC093323.1-202ENST00000635031 2045 ntBASIC24.55■■□□□ 1.52
TCRBV9S1A1TA0A576 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TCRBV9S1A1TA0A576 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TCRBV9S1A1TA0A576 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
TCRBV9S1A1TA0A576 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TCRBV9S1A1TA0A576 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
TCRBV9S1A1TA0A576 MIR219A2-201ENST00000608502 1504 ntBASIC24.53■■□□□ 1.52
TCRBV9S1A1TA0A576 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms