Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LINC00959A0A1B0GUT2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00959A0A1B0GUT2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
LINC00959A0A1B0GUT2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00959A0A1B0GUT2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LINC00959A0A1B0GUT2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.65■□□□□ 0.26
LINC00959A0A1B0GUT2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00959A0A1B0GUT2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.65■□□□□ 0.26
LINC00959A0A1B0GUT2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LINC00959A0A1B0GUT2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.64■□□□□ 0.25
LINC00959A0A1B0GUT2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00959A0A1B0GUT2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LINC00959A0A1B0GUT2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.64■□□□□ 0.25
LINC00959A0A1B0GUT2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC00959A0A1B0GUT2 LINC01971-201ENST00000617888 1048 ntBASIC16.64■□□□□ 0.25
LINC00959A0A1B0GUT2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LINC00959A0A1B0GUT2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00959A0A1B0GUT2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00959A0A1B0GUT2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.63■□□□□ 0.25
LINC00959A0A1B0GUT2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00959A0A1B0GUT2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00959A0A1B0GUT2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00959A0A1B0GUT2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC00959A0A1B0GUT2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.63■□□□□ 0.25
LINC00959A0A1B0GUT2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00959A0A1B0GUT2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00959A0A1B0GUT2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC16.62■□□□□ 0.25
LINC00959A0A1B0GUT2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC16.62■□□□□ 0.25
LINC00959A0A1B0GUT2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.62■□□□□ 0.25
LINC00959A0A1B0GUT2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00959A0A1B0GUT2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00959A0A1B0GUT2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00959A0A1B0GUT2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LINC00959A0A1B0GUT2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00959A0A1B0GUT2 AC008813.1-201ENST00000536597 885 ntBASIC16.61■□□□□ 0.25
LINC00959A0A1B0GUT2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LINC00959A0A1B0GUT2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LINC00959A0A1B0GUT2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00959A0A1B0GUT2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00959A0A1B0GUT2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00959A0A1B0GUT2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 DUX4L13-201ENST00000554103 1267 ntBASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 DUX4L15-201ENST00000611059 1267 ntBASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 DUX4L23-201ENST00000615195 1269 ntBASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 DUX4L24-201ENST00000617576 1269 ntBASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 DUX4L22-201ENST00000618238 1269 ntBASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 DUX4L20-201ENST00000619712 1269 ntBASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 DUX4L21-201ENST00000622058 1269 ntBASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 DUX4L10-201ENST00000622460 1267 ntBASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 DUX4L25-201ENST00000624915 1269 ntBASIC16.6■□□□□ 0.25
LINC00959A0A1B0GUT2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00959A0A1B0GUT2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00959A0A1B0GUT2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LINC00959A0A1B0GUT2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LINC00959A0A1B0GUT2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LINC00959A0A1B0GUT2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.58■□□□□ 0.24
LINC00959A0A1B0GUT2 AC010501.1-201ENST00000606270 1962 ntBASIC16.58■□□□□ 0.24
LINC00959A0A1B0GUT2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00959A0A1B0GUT2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00959A0A1B0GUT2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00959A0A1B0GUT2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00959A0A1B0GUT2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00959A0A1B0GUT2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00959A0A1B0GUT2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00959A0A1B0GUT2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00959A0A1B0GUT2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00959A0A1B0GUT2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00959A0A1B0GUT2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
LINC00959A0A1B0GUT2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00959A0A1B0GUT2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00959A0A1B0GUT2 RPS2P35-201ENST00000443417 897 ntBASIC16.57■□□□□ 0.24
LINC00959A0A1B0GUT2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LINC00959A0A1B0GUT2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00959A0A1B0GUT2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC00959A0A1B0GUT2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00959A0A1B0GUT2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC00959A0A1B0GUT2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LINC00959A0A1B0GUT2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00959A0A1B0GUT2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC00959A0A1B0GUT2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
LINC00959A0A1B0GUT2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LINC00959A0A1B0GUT2 ERN1-208ENST00000606895 2068 ntBASIC16.56■□□□□ 0.24
LINC00959A0A1B0GUT2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00959A0A1B0GUT2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00959A0A1B0GUT2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00959A0A1B0GUT2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00959A0A1B0GUT2 MIR219A2-201ENST00000608502 1504 ntBASIC16.55■□□□□ 0.24
LINC00959A0A1B0GUT2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC16.55■□□□□ 0.24
LINC00959A0A1B0GUT2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LINC00959A0A1B0GUT2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LINC00959A0A1B0GUT2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00959A0A1B0GUT2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LINC00959A0A1B0GUT2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00959A0A1B0GUT2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms