Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 AC091060.1-201ENST00000623524 1766 ntBASIC17.8■□□□□ 0.44
TRAV8-6A0A0B4J262 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV8-6A0A0B4J262 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV8-6A0A0B4J262 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV8-6A0A0B4J262 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-6A0A0B4J262 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-6A0A0B4J262 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-6A0A0B4J262 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-6A0A0B4J262 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAV8-6A0A0B4J262 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV8-6A0A0B4J262 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV8-6A0A0B4J262 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV8-6A0A0B4J262 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV8-6A0A0B4J262 DUX4L29-201ENST00000425409 679 ntBASIC17.78■□□□□ 0.44
TRAV8-6A0A0B4J262 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
TRAV8-6A0A0B4J262 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV8-6A0A0B4J262 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV8-6A0A0B4J262 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV8-6A0A0B4J262 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV8-6A0A0B4J262 AC012676.1-201ENST00000574705 1949 ntBASIC17.77■□□□□ 0.44
TRAV8-6A0A0B4J262 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRAV8-6A0A0B4J262 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV8-6A0A0B4J262 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV8-6A0A0B4J262 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.77■□□□□ 0.43
TRAV8-6A0A0B4J262 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV8-6A0A0B4J262 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-6A0A0B4J262 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRAV8-6A0A0B4J262 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-6A0A0B4J262 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRAV8-6A0A0B4J262 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-6A0A0B4J262 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-6A0A0B4J262 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-6A0A0B4J262 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-6A0A0B4J262 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-6A0A0B4J262 AP004833.2-201ENST00000532228 1454 ntBASIC17.75■□□□□ 0.43
TRAV8-6A0A0B4J262 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV8-6A0A0B4J262 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-6A0A0B4J262 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-6A0A0B4J262 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
TRAV8-6A0A0B4J262 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-6A0A0B4J262 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-6A0A0B4J262 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-6A0A0B4J262 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-6A0A0B4J262 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRAV8-6A0A0B4J262 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-6A0A0B4J262 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-6A0A0B4J262 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV8-6A0A0B4J262 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-6A0A0B4J262 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-6A0A0B4J262 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-6A0A0B4J262 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-6A0A0B4J262 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-6A0A0B4J262 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.74■□□□□ 0.43
TRAV8-6A0A0B4J262 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.74■□□□□ 0.43
TRAV8-6A0A0B4J262 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV8-6A0A0B4J262 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-6A0A0B4J262 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-6A0A0B4J262 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-6A0A0B4J262 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-6A0A0B4J262 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV8-6A0A0B4J262 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRAV8-6A0A0B4J262 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-6A0A0B4J262 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-6A0A0B4J262 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-6A0A0B4J262 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-6A0A0B4J262 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRAV8-6A0A0B4J262 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRAV8-6A0A0B4J262 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-6A0A0B4J262 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV8-6A0A0B4J262 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRAV8-6A0A0B4J262 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV8-6A0A0B4J262 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-6A0A0B4J262 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRAV8-6A0A0B4J262 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.71■□□□□ 0.43
TRAV8-6A0A0B4J262 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-6A0A0B4J262 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-6A0A0B4J262 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-6A0A0B4J262 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV8-6A0A0B4J262 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV8-6A0A0B4J262 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRAV8-6A0A0B4J262 AC079834.2-201ENST00000609776 1949 ntBASIC17.7■□□□□ 0.42
TRAV8-6A0A0B4J262 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAV8-6A0A0B4J262 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAV8-6A0A0B4J262 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAV8-6A0A0B4J262 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAV8-6A0A0B4J262 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
TRAV8-6A0A0B4J262 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAV8-6A0A0B4J262 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV8-6A0A0B4J262 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAV8-6A0A0B4J262 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-6A0A0B4J262 LINC01003-201ENST00000564834 1764 ntBASIC17.7■□□□□ 0.42
TRAV8-6A0A0B4J262 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV8-6A0A0B4J262 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-6A0A0B4J262 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-6A0A0B4J262 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-6A0A0B4J262 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.69■□□□□ 0.42
TRAV8-6A0A0B4J262 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-6A0A0B4J262 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAV8-6A0A0B4J262 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-6A0A0B4J262 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms