Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV12-1A0A0B4J245 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV12-1A0A0B4J245 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV12-1A0A0B4J245 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV12-1A0A0B4J245 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRAV12-1A0A0B4J245 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV12-1A0A0B4J245 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV12-1A0A0B4J245 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRAV12-1A0A0B4J245 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV12-1A0A0B4J245 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV12-1A0A0B4J245 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRAV12-1A0A0B4J245 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 AC138932.3-201ENST00000567634 1902 ntBASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 AC010501.1-201ENST00000606270 1962 ntBASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 AC079834.2-201ENST00000609776 1949 ntBASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TRAV12-1A0A0B4J245 AC142472.1-201ENST00000612013 1741 ntBASIC17.18■□□□□ 0.34
TRAV12-1A0A0B4J245 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV12-1A0A0B4J245 AC022211.4-201ENST00000625094 2161 ntBASIC17.18■□□□□ 0.34
TRAV12-1A0A0B4J245 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV12-1A0A0B4J245 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV12-1A0A0B4J245 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV12-1A0A0B4J245 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV12-1A0A0B4J245 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV12-1A0A0B4J245 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV12-1A0A0B4J245 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRAV12-1A0A0B4J245 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV12-1A0A0B4J245 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV12-1A0A0B4J245 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV12-1A0A0B4J245 WHAMMP3-201ENST00000611636 1609 ntBASIC17.16■□□□□ 0.34
TRAV12-1A0A0B4J245 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV12-1A0A0B4J245 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV12-1A0A0B4J245 AC068473.5-201ENST00000616428 2072 ntBASIC17.16■□□□□ 0.34
TRAV12-1A0A0B4J245 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV12-1A0A0B4J245 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-1A0A0B4J245 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV12-1A0A0B4J245 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-1A0A0B4J245 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV12-1A0A0B4J245 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-1A0A0B4J245 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-1A0A0B4J245 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRAV12-1A0A0B4J245 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-1A0A0B4J245 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV12-1A0A0B4J245 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-1A0A0B4J245 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-1A0A0B4J245 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
TRAV12-1A0A0B4J245 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV12-1A0A0B4J245 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-1A0A0B4J245 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-1A0A0B4J245 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-1A0A0B4J245 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-1A0A0B4J245 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-1A0A0B4J245 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-1A0A0B4J245 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-1A0A0B4J245 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-1A0A0B4J245 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV12-1A0A0B4J245 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-1A0A0B4J245 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV12-1A0A0B4J245 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV12-1A0A0B4J245 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-1A0A0B4J245 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-1A0A0B4J245 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-1A0A0B4J245 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-1A0A0B4J245 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRAV12-1A0A0B4J245 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-1A0A0B4J245 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-1A0A0B4J245 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-1A0A0B4J245 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-1A0A0B4J245 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-1A0A0B4J245 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV12-1A0A0B4J245 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV12-1A0A0B4J245 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV12-1A0A0B4J245 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV12-1A0A0B4J245 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-1A0A0B4J245 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRAV12-1A0A0B4J245 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
TRAV12-1A0A0B4J245 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-1A0A0B4J245 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-1A0A0B4J245 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.11■□□□□ 0.33
TRAV12-1A0A0B4J245 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV12-1A0A0B4J245 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-1A0A0B4J245 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV12-1A0A0B4J245 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-1A0A0B4J245 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV12-1A0A0B4J245 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV12-1A0A0B4J245 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-1A0A0B4J245 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV12-1A0A0B4J245 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV12-1A0A0B4J245 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV12-1A0A0B4J245 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms