Protein–RNA interactions for Protein: A0A075B6W5

TRAV23DV6, T-cell receptor alpha variable 23/delta variable 6 (Fragment), humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV23DV6A0A075B6W5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV23DV6A0A075B6W5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRAV23DV6A0A075B6W5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV23DV6A0A075B6W5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV23DV6A0A075B6W5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV23DV6A0A075B6W5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV23DV6A0A075B6W5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV23DV6A0A075B6W5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV23DV6A0A075B6W5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV23DV6A0A075B6W5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV23DV6A0A075B6W5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV23DV6A0A075B6W5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV23DV6A0A075B6W5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV23DV6A0A075B6W5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV23DV6A0A075B6W5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV23DV6A0A075B6W5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC15.73■□□□□ 0.11
TRAV23DV6A0A075B6W5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV23DV6A0A075B6W5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV23DV6A0A075B6W5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV23DV6A0A075B6W5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV23DV6A0A075B6W5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV23DV6A0A075B6W5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV23DV6A0A075B6W5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV23DV6A0A075B6W5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV23DV6A0A075B6W5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV23DV6A0A075B6W5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV23DV6A0A075B6W5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV23DV6A0A075B6W5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV23DV6A0A075B6W5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV23DV6A0A075B6W5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV23DV6A0A075B6W5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV23DV6A0A075B6W5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV23DV6A0A075B6W5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV23DV6A0A075B6W5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV23DV6A0A075B6W5 CAHM-201ENST00000604200 896 ntBASIC15.71■□□□□ 0.11
TRAV23DV6A0A075B6W5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV23DV6A0A075B6W5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV23DV6A0A075B6W5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV23DV6A0A075B6W5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV23DV6A0A075B6W5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV23DV6A0A075B6W5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV23DV6A0A075B6W5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV23DV6A0A075B6W5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV23DV6A0A075B6W5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV23DV6A0A075B6W5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV23DV6A0A075B6W5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV23DV6A0A075B6W5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV23DV6A0A075B6W5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV23DV6A0A075B6W5 MIR762-201ENST00000390236 83 ntBASIC15.69■□□□□ 0.1
TRAV23DV6A0A075B6W5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV23DV6A0A075B6W5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV23DV6A0A075B6W5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV23DV6A0A075B6W5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAV23DV6A0A075B6W5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV23DV6A0A075B6W5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV23DV6A0A075B6W5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV23DV6A0A075B6W5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV23DV6A0A075B6W5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV23DV6A0A075B6W5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV23DV6A0A075B6W5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV23DV6A0A075B6W5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV23DV6A0A075B6W5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV23DV6A0A075B6W5 LINC00273-201ENST00000539813 1452 ntBASIC15.68■□□□□ 0.1
TRAV23DV6A0A075B6W5 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV23DV6A0A075B6W5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV23DV6A0A075B6W5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV23DV6A0A075B6W5 AC142472.1-201ENST00000612013 1741 ntBASIC15.68■□□□□ 0.1
TRAV23DV6A0A075B6W5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV23DV6A0A075B6W5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV23DV6A0A075B6W5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV23DV6A0A075B6W5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV23DV6A0A075B6W5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV23DV6A0A075B6W5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRAV23DV6A0A075B6W5 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV23DV6A0A075B6W5 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV23DV6A0A075B6W5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV23DV6A0A075B6W5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC15.65■□□□□ 0.1
TRAV23DV6A0A075B6W5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV23DV6A0A075B6W5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV23DV6A0A075B6W5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV23DV6A0A075B6W5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV23DV6A0A075B6W5 AC108673.1-201ENST00000510422 1159 ntBASIC15.65■□□□□ 0.1
TRAV23DV6A0A075B6W5 CHML-205ENST00000638160 705 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAV23DV6A0A075B6W5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV23DV6A0A075B6W5 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV23DV6A0A075B6W5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms