Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 AL139125.2-201ENST00000623134 1869 ntBASIC20.94■□□□□ 0.94
TRAV6A0A075B6T7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV6A0A075B6T7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV6A0A075B6T7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV6A0A075B6T7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.94■□□□□ 0.94
TRAV6A0A075B6T7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV6A0A075B6T7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAV6A0A075B6T7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV6A0A075B6T7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV6A0A075B6T7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV6A0A075B6T7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV6A0A075B6T7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRAV6A0A075B6T7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV6A0A075B6T7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAV6A0A075B6T7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV6A0A075B6T7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV6A0A075B6T7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TRAV6A0A075B6T7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TRAV6A0A075B6T7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV6A0A075B6T7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV6A0A075B6T7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV6A0A075B6T7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRAV6A0A075B6T7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
TRAV6A0A075B6T7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV6A0A075B6T7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAV6A0A075B6T7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV6A0A075B6T7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV6A0A075B6T7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.89■□□□□ 0.93
TRAV6A0A075B6T7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV6A0A075B6T7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV6A0A075B6T7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAV6A0A075B6T7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV6A0A075B6T7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV6A0A075B6T7 AC138932.3-201ENST00000567634 1902 ntBASIC20.88■□□□□ 0.93
TRAV6A0A075B6T7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV6A0A075B6T7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV6A0A075B6T7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAV6A0A075B6T7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAV6A0A075B6T7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV6A0A075B6T7 AL133380.1-201ENST00000506013 324 ntBASIC20.87■□□□□ 0.93
TRAV6A0A075B6T7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAV6A0A075B6T7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.87■□□□□ 0.93
TRAV6A0A075B6T7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV6A0A075B6T7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV6A0A075B6T7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAV6A0A075B6T7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV6A0A075B6T7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.87■□□□□ 0.93
TRAV6A0A075B6T7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV6A0A075B6T7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV6A0A075B6T7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TRAV6A0A075B6T7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TRAV6A0A075B6T7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV6A0A075B6T7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV6A0A075B6T7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TRAV6A0A075B6T7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV6A0A075B6T7 ZNRF2P1-201ENST00000441407 443 ntBASIC20.85■□□□□ 0.93
TRAV6A0A075B6T7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.85■□□□□ 0.93
TRAV6A0A075B6T7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV6A0A075B6T7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV6A0A075B6T7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TRAV6A0A075B6T7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV6A0A075B6T7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV6A0A075B6T7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV6A0A075B6T7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV6A0A075B6T7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV6A0A075B6T7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV6A0A075B6T7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TRAV6A0A075B6T7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV6A0A075B6T7 AC022211.4-201ENST00000625094 2161 ntBASIC20.83■□□□□ 0.93
TRAV6A0A075B6T7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV6A0A075B6T7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV6A0A075B6T7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAV6A0A075B6T7 AC068473.5-201ENST00000616428 2072 ntBASIC20.83■□□□□ 0.93
TRAV6A0A075B6T7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.83■□□□□ 0.93
TRAV6A0A075B6T7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV6A0A075B6T7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TRAV6A0A075B6T7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV6A0A075B6T7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TRAV6A0A075B6T7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV6A0A075B6T7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV6A0A075B6T7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV6A0A075B6T7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAV6A0A075B6T7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
TRAV6A0A075B6T7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAV6A0A075B6T7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV6A0A075B6T7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV6A0A075B6T7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
TRAV6A0A075B6T7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAV6A0A075B6T7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV6A0A075B6T7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV6A0A075B6T7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV6A0A075B6T7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV6A0A075B6T7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV6A0A075B6T7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV6A0A075B6T7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV6A0A075B6T7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV6A0A075B6T7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAV6A0A075B6T7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TRAV6A0A075B6T7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV6A0A075B6T7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms