Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 MIR6765-201ENST00000614092 87 ntBASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 AC133552.2-201ENST00000619106 1032 ntBASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC9.2□□□□□ -0.94
LINC01558Q9Y6Z2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 AC073347.1-201ENST00000421633 2643 ntBASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 AC104417.2-201ENST00000562989 1793 ntBASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 KRT18P24-201ENST00000344739 1156 ntBASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 KRT8P20-201ENST00000423953 1409 ntBASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LINC01558Q9Y6Z2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms