Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ZNF304Q9HCX3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF304Q9HCX3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 RCN1P2-201ENST00000398357 915 ntBASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ZNF304Q9HCX3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.89■□□□□ 0.3
ZNF304Q9HCX3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
ZNF304Q9HCX3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF304Q9HCX3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF304Q9HCX3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF304Q9HCX3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF304Q9HCX3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF304Q9HCX3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ZNF304Q9HCX3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
ZNF304Q9HCX3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF304Q9HCX3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF304Q9HCX3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF304Q9HCX3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF304Q9HCX3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF304Q9HCX3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms