Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRF2Q9HAW0 SIRPAP1-201ENST00000448467 1770 ntBASIC17.05■□□□□ 0.32
BRF2Q9HAW0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 Z83836.1-201ENST00000624605 1642 ntBASIC17.04■□□□□ 0.32
BRF2Q9HAW0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 AL671277.2-201ENST00000458060 996 ntBASIC17.04■□□□□ 0.32
BRF2Q9HAW0 DUX4L26-201ENST00000489078 1255 ntBASIC17.04■□□□□ 0.32
BRF2Q9HAW0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRF2Q9HAW0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 AL645608.8-201ENST00000606034 2086 ntBASIC17.03■□□□□ 0.32
BRF2Q9HAW0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 PP12613-201ENST00000424958 2230 ntBASIC17.03■□□□□ 0.32
BRF2Q9HAW0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 AC096633.1-201ENST00000422446 749 ntBASIC17.03■□□□□ 0.32
BRF2Q9HAW0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 RNF126P1-202ENST00000569893 925 ntBASIC17.03■□□□□ 0.32
BRF2Q9HAW0 RN7SL850P-201ENST00000579959 291 ntBASIC17.03■□□□□ 0.32
BRF2Q9HAW0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
BRF2Q9HAW0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 AC139713.2-201ENST00000641328 2723 ntBASIC17.02■□□□□ 0.32
BRF2Q9HAW0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 AC005104.2-201ENST00000427818 678 ntBASIC17.02■□□□□ 0.32
BRF2Q9HAW0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
BRF2Q9HAW0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms