Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 AC133963.1-201ENST00000504166 1679 ntBASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 APP-205ENST00000358918 2366 ntTSL 5 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 SUZ12P1-203ENST00000578195 985 ntBASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 MIR3665-201ENST00000578708 105 ntBASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 AC087393.1-201ENST00000582896 145 ntBASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC10.28□□□□□ -0.76
CYSTM1Q9H1C7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
CYSTM1Q9H1C7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
CYSTM1Q9H1C7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
CYSTM1Q9H1C7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
CYSTM1Q9H1C7 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
CYSTM1Q9H1C7 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
CYSTM1Q9H1C7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
CYSTM1Q9H1C7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC10.27□□□□□ -0.77
CYSTM1Q9H1C7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms