Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-2Q9C056 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX6-2Q9C056 AL121906.2-201ENST00000621597 723 ntBASIC14.46□□□□□ -0.09
NKX6-2Q9C056 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NKX6-2Q9C056 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-2Q9C056 AC068587.6-202ENST00000641839 5619 ntBASIC14.46□□□□□ -0.09
NKX6-2Q9C056 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.46□□□□□ -0.09
NKX6-2Q9C056 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-2Q9C056 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
NKX6-2Q9C056 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-2Q9C056 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-2Q9C056 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
NKX6-2Q9C056 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
NKX6-2Q9C056 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NKX6-2Q9C056 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NKX6-2Q9C056 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NKX6-2Q9C056 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
NKX6-2Q9C056 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NKX6-2Q9C056 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NKX6-2Q9C056 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
NKX6-2Q9C056 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 TUBB8P6-201ENST00000436895 1288 ntBASIC14.45□□□□□ -0.1
NKX6-2Q9C056 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 DUX4L16-201ENST00000555130 1264 ntBASIC14.45□□□□□ -0.1
NKX6-2Q9C056 NTF6G-201ENST00000591094 616 ntBASIC14.45□□□□□ -0.1
NKX6-2Q9C056 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 AC231657.2-201ENST00000624556 255 ntBASIC14.45□□□□□ -0.1
NKX6-2Q9C056 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 HEIH-201ENST00000623091 1652 ntBASIC14.45□□□□□ -0.1
NKX6-2Q9C056 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 KRT17P1-201ENST00000399211 1546 ntBASIC14.45□□□□□ -0.1
NKX6-2Q9C056 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
NKX6-2Q9C056 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX6-2Q9C056 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms