Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 AC006116.8-202ENST00000587620 1550 ntBASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 AL591684.3-201ENST00000605187 298 ntBASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 AL732292.2-201ENST00000609649 430 ntBASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAM1L1Q8N609 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.58■□□□□ 0.41
TRAM1L1Q8N609 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.58■□□□□ 0.41
TRAM1L1Q8N609 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAM1L1Q8N609 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRAM1L1Q8N609 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
TRAM1L1Q8N609 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
TRAM1L1Q8N609 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.58■□□□□ 0.41
TRAM1L1Q8N609 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAM1L1Q8N609 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAM1L1Q8N609 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRAM1L1Q8N609 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAM1L1Q8N609 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAM1L1Q8N609 AL450487.1-201ENST00000426799 995 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms