Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 AC138028.4-201ENST00000564984 1845 ntBASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 AL160237.2-201ENST00000556165 472 ntBASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 AL592071.1-201ENST00000611956 408 ntBASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC33Q8N5R6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCDC33Q8N5R6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
CCDC33Q8N5R6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 GUSBP12-201ENST00000513727 720 ntBASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 AC009065.1-201ENST00000564055 1225 ntBASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 Z69720.1-201ENST00000601483 472 ntBASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC33Q8N5R6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 AC008764.6-201ENST00000595909 2069 ntBASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 AC079776.4-201ENST00000511039 504 ntBASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms