Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
RTTNQ86VV8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTTNQ86VV8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTTNQ86VV8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTTNQ86VV8 AC090340.1-201ENST00000620778 4980 ntBASIC15.76■□□□□ 0.11
RTTNQ86VV8 LINC00167-201ENST00000530583 1419 ntBASIC15.76■□□□□ 0.11
RTTNQ86VV8 AC012317.2-201ENST00000623305 2251 ntBASIC15.76■□□□□ 0.11
RTTNQ86VV8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.76■□□□□ 0.11
RTTNQ86VV8 REXO1L11P-201ENST00000620964 1927 ntBASIC15.75■□□□□ 0.11
RTTNQ86VV8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTTNQ86VV8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RTTNQ86VV8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTTNQ86VV8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTTNQ86VV8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTTNQ86VV8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTTNQ86VV8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTTNQ86VV8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTTNQ86VV8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTTNQ86VV8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTTNQ86VV8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTTNQ86VV8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTTNQ86VV8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.75■□□□□ 0.11
RTTNQ86VV8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.74■□□□□ 0.11
RTTNQ86VV8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.74■□□□□ 0.11
RTTNQ86VV8 LTB4R2-202ENST00000528054 3092 ntBASIC15.74■□□□□ 0.11
RTTNQ86VV8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.74■□□□□ 0.11
RTTNQ86VV8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
RTTNQ86VV8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
RTTNQ86VV8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.74■□□□□ 0.11
RTTNQ86VV8 ZNF444P1-201ENST00000559497 298 ntBASIC15.74■□□□□ 0.11
RTTNQ86VV8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.74■□□□□ 0.11
RTTNQ86VV8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.74■□□□□ 0.11
RTTNQ86VV8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RTTNQ86VV8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
RTTNQ86VV8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
RTTNQ86VV8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RTTNQ86VV8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.74■□□□□ 0.11
RTTNQ86VV8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.74■□□□□ 0.11
RTTNQ86VV8 AC117500.6-201ENST00000624871 588 ntBASIC15.74■□□□□ 0.11
RTTNQ86VV8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTTNQ86VV8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.73■□□□□ 0.11
RTTNQ86VV8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.73■□□□□ 0.11
RTTNQ86VV8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RTTNQ86VV8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RTTNQ86VV8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RTTNQ86VV8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RTTNQ86VV8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.73■□□□□ 0.11
RTTNQ86VV8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
RTTNQ86VV8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTTNQ86VV8 ATP5G2P1-201ENST00000433580 426 ntBASIC15.73■□□□□ 0.11
RTTNQ86VV8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.73■□□□□ 0.11
RTTNQ86VV8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.73■□□□□ 0.11
RTTNQ86VV8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
RTTNQ86VV8 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms