Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.56■□□□□ 0.56
IRX4P78413 RNF126P1-202ENST00000569893 925 ntBASIC18.56■□□□□ 0.56
IRX4P78413 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.56■□□□□ 0.56
IRX4P78413 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
IRX4P78413 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.56■□□□□ 0.56
IRX4P78413 AL136038.4-201ENST00000603606 1261 ntBASIC18.56■□□□□ 0.56
IRX4P78413 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.56■□□□□ 0.56
IRX4P78413 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX4P78413 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
IRX4P78413 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX4P78413 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
IRX4P78413 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX4P78413 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IRX4P78413 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
IRX4P78413 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.56■□□□□ 0.56
IRX4P78413 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.55■□□□□ 0.56
IRX4P78413 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.55■□□□□ 0.56
IRX4P78413 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 AL391807.1-203ENST00000604392 2365 ntBASIC18.55■□□□□ 0.56
IRX4P78413 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.55■□□□□ 0.56
IRX4P78413 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
IRX4P78413 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
IRX4P78413 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
IRX4P78413 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.55■□□□□ 0.56
IRX4P78413 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.55■□□□□ 0.56
IRX4P78413 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.55■□□□□ 0.56
IRX4P78413 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 AC012615.1-201ENST00000565797 1299 ntBASIC18.55■□□□□ 0.56
IRX4P78413 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
IRX4P78413 SLC25A6P4-201ENST00000586535 553 ntBASIC18.55■□□□□ 0.56
IRX4P78413 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.55■□□□□ 0.56
IRX4P78413 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.55■□□□□ 0.56
IRX4P78413 AC068587.9-201ENST00000641814 219 ntBASIC18.55■□□□□ 0.56
IRX4P78413 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
IRX4P78413 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
IRX4P78413 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.55■□□□□ 0.56
IRX4P78413 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.55■□□□□ 0.56
IRX4P78413 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
IRX4P78413 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
IRX4P78413 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
IRX4P78413 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.54■□□□□ 0.56
IRX4P78413 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.54■□□□□ 0.56
IRX4P78413 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.54■□□□□ 0.56
IRX4P78413 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.54■□□□□ 0.56
IRX4P78413 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.54■□□□□ 0.56
IRX4P78413 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
IRX4P78413 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.54■□□□□ 0.56
IRX4P78413 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.54■□□□□ 0.56
IRX4P78413 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.54■□□□□ 0.56
IRX4P78413 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.54■□□□□ 0.56
IRX4P78413 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
IRX4P78413 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.54■□□□□ 0.56
IRX4P78413 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
IRX4P78413 TOB2P1-201ENST00000469761 992 ntBASIC18.54■□□□□ 0.56
IRX4P78413 AC106795.1-205ENST00000512851 1056 ntBASIC18.54■□□□□ 0.56
IRX4P78413 AP002469.2-201ENST00000531724 424 ntBASIC18.54■□□□□ 0.56
IRX4P78413 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
IRX4P78413 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.54■□□□□ 0.56
IRX4P78413 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
IRX4P78413 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 AC012313.1-201ENST00000593393 3059 ntBASIC18.54■□□□□ 0.56
IRX4P78413 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms