Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5BP61020 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB5BP61020 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5BP61020 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RAB5BP61020 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5BP61020 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5BP61020 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.97□□□□□ -0.17
RAB5BP61020 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5BP61020 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5BP61020 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5BP61020 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RAB5BP61020 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5BP61020 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5BP61020 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.97□□□□□ -0.17
RAB5BP61020 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB5BP61020 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB5BP61020 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB5BP61020 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5BP61020 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5BP61020 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
RAB5BP61020 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.96□□□□□ -0.17
RAB5BP61020 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5BP61020 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RAB5BP61020 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RAB5BP61020 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5BP61020 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
RAB5BP61020 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
RAB5BP61020 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
RAB5BP61020 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
RAB5BP61020 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5BP61020 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5BP61020 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5BP61020 SNX3-202ENST00000349379 890 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB5BP61020 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5BP61020 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5BP61020 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.96□□□□□ -0.17
RAB5BP61020 AL356740.2-201ENST00000601559 647 ntBASIC13.96□□□□□ -0.17
RAB5BP61020 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5BP61020 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB5BP61020 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAB5BP61020 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
RAB5BP61020 AC126335.2-201ENST00000623362 4637 ntBASIC13.96□□□□□ -0.18
RAB5BP61020 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAB5BP61020 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.96□□□□□ -0.18
RAB5BP61020 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
RAB5BP61020 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
RAB5BP61020 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.96□□□□□ -0.18
RAB5BP61020 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB5BP61020 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB5BP61020 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB5BP61020 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB5BP61020 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RAB5BP61020 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB5BP61020 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB5BP61020 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB5BP61020 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RAB5BP61020 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RAB5BP61020 SERBP1P1-201ENST00000396021 1160 ntBASIC13.95□□□□□ -0.18
RAB5BP61020 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 MFF-208ENST00000409616 1247 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB5BP61020 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RAB5BP61020 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB5BP61020 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RAB5BP61020 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RAB5BP61020 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB5BP61020 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB5BP61020 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB5BP61020 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB5BP61020 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB5BP61020 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB5BP61020 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB5BP61020 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB5BP61020 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB5BP61020 AL355312.1-201ENST00000407115 2176 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms