Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCNKAP51800 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLCNKAP51800 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCNKAP51800 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCNKAP51800 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCNKAP51800 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCNKAP51800 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCNKAP51800 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCNKAP51800 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CLCNKAP51800 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.47■□□□□ 0.39
CLCNKAP51800 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCNKAP51800 AL121894.2-201ENST00000602977 491 ntBASIC17.47■□□□□ 0.39
CLCNKAP51800 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.47■□□□□ 0.39
CLCNKAP51800 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCNKAP51800 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCNKAP51800 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CLCNKAP51800 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CLCNKAP51800 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCNKAP51800 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCNKAP51800 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCNKAP51800 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCNKAP51800 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCNKAP51800 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCNKAP51800 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLCNKAP51800 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCNKAP51800 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCNKAP51800 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLCNKAP51800 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCNKAP51800 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLCNKAP51800 FLJ13224-201ENST00000313737 1514 ntBASIC17.47■□□□□ 0.39
CLCNKAP51800 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLCNKAP51800 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCNKAP51800 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCNKAP51800 AL354751.1-201ENST00000412768 1863 ntBASIC17.46■□□□□ 0.39
CLCNKAP51800 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLCNKAP51800 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCNKAP51800 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLCNKAP51800 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCNKAP51800 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLCNKAP51800 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCNKAP51800 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCNKAP51800 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.46■□□□□ 0.39
CLCNKAP51800 SAPCD2P3-201ENST00000455031 850 ntBASIC17.46■□□□□ 0.39
CLCNKAP51800 EMBP1-201ENST00000458200 901 ntBASIC17.46■□□□□ 0.39
CLCNKAP51800 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.46■□□□□ 0.39
CLCNKAP51800 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CLCNKAP51800 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.46■□□□□ 0.39
CLCNKAP51800 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCNKAP51800 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCNKAP51800 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.46■□□□□ 0.39
CLCNKAP51800 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.46■□□□□ 0.39
CLCNKAP51800 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLCNKAP51800 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLCNKAP51800 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CLCNKAP51800 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLCNKAP51800 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.46■□□□□ 0.39
CLCNKAP51800 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.46■□□□□ 0.39
CLCNKAP51800 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.46■□□□□ 0.39
CLCNKAP51800 AC100803.2-201ENST00000562459 1963 ntBASIC17.46■□□□□ 0.39
CLCNKAP51800 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLCNKAP51800 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CLCNKAP51800 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLCNKAP51800 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.45■□□□□ 0.38
CLCNKAP51800 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.45■□□□□ 0.38
CLCNKAP51800 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.45■□□□□ 0.38
CLCNKAP51800 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.45■□□□□ 0.38
CLCNKAP51800 AC138028.4-201ENST00000564984 1845 ntBASIC17.45■□□□□ 0.38
CLCNKAP51800 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.45■□□□□ 0.38
CLCNKAP51800 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.45■□□□□ 0.38
CLCNKAP51800 AKR1C7P-201ENST00000305623 895 ntBASIC17.45■□□□□ 0.38
CLCNKAP51800 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.45■□□□□ 0.38
CLCNKAP51800 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.45■□□□□ 0.38
CLCNKAP51800 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.45■□□□□ 0.38
CLCNKAP51800 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.45■□□□□ 0.38
CLCNKAP51800 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.45■□□□□ 0.38
CLCNKAP51800 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CLCNKAP51800 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLCNKAP51800 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.45■□□□□ 0.38
CLCNKAP51800 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms