Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PBX3P40426 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.96■□□□□ 0.63
PBX3P40426 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PBX3P40426 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PBX3P40426 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.96■□□□□ 0.63
PBX3P40426 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.96■□□□□ 0.63
PBX3P40426 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PBX3P40426 KRT18P2-201ENST00000447938 1258 ntBASIC18.96■□□□□ 0.63
PBX3P40426 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PBX3P40426 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.96■□□□□ 0.63
PBX3P40426 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.96■□□□□ 0.63
PBX3P40426 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.96■□□□□ 0.63
PBX3P40426 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.96■□□□□ 0.63
PBX3P40426 AC006557.2-201ENST00000592985 1240 ntBASIC18.96■□□□□ 0.63
PBX3P40426 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.96■□□□□ 0.63
PBX3P40426 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.96■□□□□ 0.63
PBX3P40426 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PBX3P40426 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.96■□□□□ 0.63
PBX3P40426 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PBX3P40426 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PBX3P40426 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.96■□□□□ 0.63
PBX3P40426 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.96■□□□□ 0.63
PBX3P40426 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PBX3P40426 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PBX3P40426 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PBX3P40426 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PBX3P40426 AC073592.3-201ENST00000625118 1834 ntBASIC18.95■□□□□ 0.62
PBX3P40426 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PBX3P40426 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PBX3P40426 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
PBX3P40426 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PBX3P40426 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.95■□□□□ 0.62
PBX3P40426 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.95■□□□□ 0.62
PBX3P40426 SIGLEC16-201ENST00000599858 1437 ntBASIC18.95■□□□□ 0.62
PBX3P40426 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PBX3P40426 ELK2BP-201ENST00000415014 1224 ntBASIC18.95■□□□□ 0.62
PBX3P40426 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.95■□□□□ 0.62
PBX3P40426 AC136632.2-201ENST00000512891 861 ntBASIC18.95■□□□□ 0.62
PBX3P40426 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.95■□□□□ 0.62
PBX3P40426 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.95■□□□□ 0.62
PBX3P40426 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.95■□□□□ 0.62
PBX3P40426 MIR3687-2-201ENST00000577708 61 ntBASIC18.95■□□□□ 0.62
PBX3P40426 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.95■□□□□ 0.62
PBX3P40426 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.95■□□□□ 0.62
PBX3P40426 AP001160.2-201ENST00000596071 487 ntBASIC18.95■□□□□ 0.62
PBX3P40426 MIR3687-1-201ENST00000614492 61 ntBASIC18.95■□□□□ 0.62
PBX3P40426 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
PBX3P40426 AC134684.3-201ENST00000641758 218 ntBASIC18.95■□□□□ 0.62
PBX3P40426 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PBX3P40426 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PBX3P40426 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PBX3P40426 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PBX3P40426 AC132938.5-201ENST00000624980 1813 ntBASIC18.95■□□□□ 0.62
PBX3P40426 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PBX3P40426 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.94■□□□□ 0.62
PBX3P40426 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PBX3P40426 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PBX3P40426 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PBX3P40426 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PBX3P40426 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PBX3P40426 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.94■□□□□ 0.62
PBX3P40426 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.94■□□□□ 0.62
PBX3P40426 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.94■□□□□ 0.62
PBX3P40426 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PBX3P40426 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.94■□□□□ 0.62
PBX3P40426 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.94■□□□□ 0.62
PBX3P40426 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PBX3P40426 COX5BP2-201ENST00000392354 334 ntBASIC18.94■□□□□ 0.62
PBX3P40426 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.94■□□□□ 0.62
PBX3P40426 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PBX3P40426 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PBX3P40426 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
PBX3P40426 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.94■□□□□ 0.62
PBX3P40426 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.94■□□□□ 0.62
PBX3P40426 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.94■□□□□ 0.62
PBX3P40426 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.94■□□□□ 0.62
PBX3P40426 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.94■□□□□ 0.62
PBX3P40426 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PBX3P40426 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PBX3P40426 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PBX3P40426 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PBX3P40426 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.94■□□□□ 0.62
PBX3P40426 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PBX3P40426 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PBX3P40426 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.94■□□□□ 0.62
PBX3P40426 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PBX3P40426 AC006504.4-201ENST00000592118 1568 ntBASIC18.93■□□□□ 0.62
PBX3P40426 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PBX3P40426 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PBX3P40426 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PBX3P40426 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PBX3P40426 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PBX3P40426 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.93■□□□□ 0.62
PBX3P40426 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PBX3P40426 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PBX3P40426 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.93■□□□□ 0.62
PBX3P40426 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PBX3P40426 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.93■□□□□ 0.62
PBX3P40426 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PBX3P40426 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms