Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
XPAP23025 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
XPAP23025 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
XPAP23025 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.97■□□□□ 0.47
XPAP23025 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
XPAP23025 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.97■□□□□ 0.47
XPAP23025 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.97■□□□□ 0.47
XPAP23025 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.97■□□□□ 0.47
XPAP23025 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.97■□□□□ 0.47
XPAP23025 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.97■□□□□ 0.47
XPAP23025 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.97■□□□□ 0.47
XPAP23025 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.97■□□□□ 0.47
XPAP23025 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.97■□□□□ 0.47
XPAP23025 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.97■□□□□ 0.47
XPAP23025 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
XPAP23025 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.97■□□□□ 0.47
XPAP23025 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
XPAP23025 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XPAP23025 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XPAP23025 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
XPAP23025 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.96■□□□□ 0.47
XPAP23025 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
XPAP23025 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
XPAP23025 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
XPAP23025 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
XPAP23025 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
XPAP23025 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
XPAP23025 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
XPAP23025 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.96■□□□□ 0.47
XPAP23025 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
XPAP23025 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.96■□□□□ 0.47
XPAP23025 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XPAP23025 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
XPAP23025 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.96■□□□□ 0.47
XPAP23025 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.96■□□□□ 0.47
XPAP23025 AC004870.1-201ENST00000315132 882 ntBASIC17.96■□□□□ 0.47
XPAP23025 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.96■□□□□ 0.47
XPAP23025 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.96■□□□□ 0.47
XPAP23025 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.96■□□□□ 0.47
XPAP23025 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
XPAP23025 BNIP3P18-201ENST00000593976 575 ntBASIC17.96■□□□□ 0.47
XPAP23025 AL591684.3-201ENST00000605187 298 ntBASIC17.96■□□□□ 0.47
XPAP23025 AC116407.2-201ENST00000613639 860 ntBASIC17.96■□□□□ 0.47
XPAP23025 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
XPAP23025 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
XPAP23025 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XPAP23025 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XPAP23025 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.96■□□□□ 0.47
XPAP23025 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.96■□□□□ 0.47
XPAP23025 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.96■□□□□ 0.47
XPAP23025 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.96■□□□□ 0.47
XPAP23025 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XPAP23025 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
XPAP23025 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
XPAP23025 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
XPAP23025 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
XPAP23025 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
XPAP23025 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.95■□□□□ 0.46
XPAP23025 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
XPAP23025 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.95■□□□□ 0.46
XPAP23025 TP73-AS1-210ENST00000637775 1455 ntBASIC17.95■□□□□ 0.46
XPAP23025 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.95■□□□□ 0.46
XPAP23025 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.95■□□□□ 0.46
XPAP23025 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.95■□□□□ 0.46
XPAP23025 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.95■□□□□ 0.46
XPAP23025 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.95■□□□□ 0.46
XPAP23025 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.95■□□□□ 0.46
XPAP23025 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.95■□□□□ 0.46
XPAP23025 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
XPAP23025 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
XPAP23025 AC114341.1-201ENST00000618070 349 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms