Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 FAM87A-204ENST00000613235 858 ntBASIC16.05■□□□□ 0.16
HLA-DQA2P01906 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HLA-DQA2P01906 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 NEK4P2-201ENST00000580004 1012 ntBASIC16.04■□□□□ 0.16
HLA-DQA2P01906 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DQA2P01906 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 KRT18P22-201ENST00000402024 1347 ntBASIC16.03■□□□□ 0.16
HLA-DQA2P01906 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 MIR3917-201ENST00000580971 93 ntBASIC16.03■□□□□ 0.16
HLA-DQA2P01906 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DQA2P01906 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DQA2P01906 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DQA2P01906 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DQA2P01906 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DQA2P01906 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
HLA-DQA2P01906 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DQA2P01906 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DQA2P01906 AC022898.2-201ENST00000616822 1312 ntBASIC16.02■□□□□ 0.16
HLA-DQA2P01906 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DQA2P01906 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HLA-DQA2P01906 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DQA2P01906 AC006116.8-202ENST00000587620 1550 ntBASIC16.02■□□□□ 0.16
HLA-DQA2P01906 AC093827.2-201ENST00000512654 315 ntBASIC16.02■□□□□ 0.16
HLA-DQA2P01906 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms