Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN1O95832 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN1O95832 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CLDN1O95832 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN1O95832 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN1O95832 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN1O95832 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN1O95832 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CLDN1O95832 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN1O95832 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN1O95832 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN1O95832 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CLDN1O95832 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN1O95832 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLDN1O95832 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN1O95832 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN1O95832 YBX1P5-201ENST00000509441 847 ntBASIC15.91■□□□□ 0.14
CLDN1O95832 MIR4469-201ENST00000583919 79 ntBASIC15.91■□□□□ 0.14
CLDN1O95832 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.91■□□□□ 0.14
CLDN1O95832 AC011467.4-201ENST00000594891 528 ntBASIC15.91■□□□□ 0.14
CLDN1O95832 AC106028.4-201ENST00000614509 607 ntBASIC15.91■□□□□ 0.14
CLDN1O95832 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN1O95832 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN1O95832 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CLDN1O95832 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN1O95832 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN1O95832 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN1O95832 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN1O95832 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CLDN1O95832 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CLDN1O95832 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CLDN1O95832 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN1O95832 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN1O95832 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN1O95832 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN1O95832 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN1O95832 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN1O95832 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN1O95832 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.9■□□□□ 0.14
CLDN1O95832 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CLDN1O95832 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN1O95832 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN1O95832 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN1O95832 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN1O95832 AC064836.3-201ENST00000607928 673 ntBASIC15.9■□□□□ 0.14
CLDN1O95832 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN1O95832 AC107918.4-202ENST00000641623 219 ntBASIC15.9■□□□□ 0.14
CLDN1O95832 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN1O95832 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN1O95832 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN1O95832 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN1O95832 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
CLDN1O95832 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
CLDN1O95832 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN1O95832 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN1O95832 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN1O95832 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN1O95832 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN1O95832 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN1O95832 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN1O95832 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN1O95832 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN1O95832 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN1O95832 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLDN1O95832 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN1O95832 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN1O95832 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN1O95832 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN1O95832 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN1O95832 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.89■□□□□ 0.13
CLDN1O95832 AC254562.1-201ENST00000417586 456 ntBASIC15.89■□□□□ 0.13
CLDN1O95832 MCCD1P2-201ENST00000423228 335 ntBASIC15.89■□□□□ 0.13
CLDN1O95832 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.89■□□□□ 0.13
CLDN1O95832 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CLDN1O95832 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN1O95832 AC011467.2-201ENST00000598425 242 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms