Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
GPC4O75487 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
GPC4O75487 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
GPC4O75487 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
GPC4O75487 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
GPC4O75487 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
GPC4O75487 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
GPC4O75487 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.89■□□□□ 0.45
GPC4O75487 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.89■□□□□ 0.45
GPC4O75487 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
GPC4O75487 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.89■□□□□ 0.45
GPC4O75487 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
GPC4O75487 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
GPC4O75487 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.88■□□□□ 0.45
GPC4O75487 FLJ13224-201ENST00000313737 1514 ntBASIC17.88■□□□□ 0.45
GPC4O75487 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
GPC4O75487 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
GPC4O75487 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.88■□□□□ 0.45
GPC4O75487 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.88■□□□□ 0.45
GPC4O75487 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 AL049597.2-201ENST00000565575 961 ntBASIC17.88■□□□□ 0.45
GPC4O75487 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.88■□□□□ 0.45
GPC4O75487 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.88■□□□□ 0.45
GPC4O75487 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
GPC4O75487 KRT89P-201ENST00000620027 1478 ntBASIC17.88■□□□□ 0.45
GPC4O75487 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GPC4O75487 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
GPC4O75487 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.87■□□□□ 0.45
GPC4O75487 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
GPC4O75487 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.87■□□□□ 0.45
GPC4O75487 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.87■□□□□ 0.45
GPC4O75487 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
GPC4O75487 AC008687.5-201ENST00000593746 558 ntBASIC17.87■□□□□ 0.45
GPC4O75487 AC024563.2-201ENST00000603282 481 ntBASIC17.87■□□□□ 0.45
GPC4O75487 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.87■□□□□ 0.45
GPC4O75487 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
GPC4O75487 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.87■□□□□ 0.45
GPC4O75487 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.87■□□□□ 0.45
GPC4O75487 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
GPC4O75487 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
GPC4O75487 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.87■□□□□ 0.45
GPC4O75487 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
GPC4O75487 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
GPC4O75487 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.86■□□□□ 0.45
GPC4O75487 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.86■□□□□ 0.45
GPC4O75487 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
GPC4O75487 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
GPC4O75487 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 MIR662-201ENST00000384847 95 ntBASIC17.86■□□□□ 0.45
GPC4O75487 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.86■□□□□ 0.45
GPC4O75487 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GPC4O75487 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms