Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.53■□□□□ 0.08
XRCC2O43543 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 AC112907.2-201ENST00000448639 330 ntBASIC15.53■□□□□ 0.08
XRCC2O43543 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.53■□□□□ 0.08
XRCC2O43543 AL359075.1-203ENST00000462729 1002 ntBASIC15.53■□□□□ 0.08
XRCC2O43543 AP003733.1-201ENST00000491725 852 ntBASIC15.53■□□□□ 0.08
XRCC2O43543 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.53■□□□□ 0.08
XRCC2O43543 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.53■□□□□ 0.08
XRCC2O43543 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.53■□□□□ 0.08
XRCC2O43543 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
XRCC2O43543 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
XRCC2O43543 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.53■□□□□ 0.08
XRCC2O43543 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
XRCC2O43543 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
XRCC2O43543 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
XRCC2O43543 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
XRCC2O43543 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.52■□□□□ 0.08
XRCC2O43543 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
XRCC2O43543 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
XRCC2O43543 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
XRCC2O43543 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
XRCC2O43543 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
XRCC2O43543 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
XRCC2O43543 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.52■□□□□ 0.08
XRCC2O43543 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.52■□□□□ 0.08
XRCC2O43543 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.52■□□□□ 0.08
XRCC2O43543 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
XRCC2O43543 HBZP1-201ENST00000354915 429 ntBASIC15.52■□□□□ 0.08
XRCC2O43543 MIR662-201ENST00000384847 95 ntBASIC15.52■□□□□ 0.08
XRCC2O43543 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
XRCC2O43543 TSPY12P-201ENST00000421279 868 ntBASIC15.52■□□□□ 0.08
XRCC2O43543 AC092597.1-201ENST00000487352 616 ntBASIC15.52■□□□□ 0.08
XRCC2O43543 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.52■□□□□ 0.08
XRCC2O43543 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.52■□□□□ 0.08
XRCC2O43543 AC004263.2-201ENST00000617183 678 ntBASIC15.52■□□□□ 0.08
XRCC2O43543 AC009154.2-201ENST00000621177 724 ntBASIC15.52■□□□□ 0.08
XRCC2O43543 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
XRCC2O43543 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
XRCC2O43543 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
XRCC2O43543 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
XRCC2O43543 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
XRCC2O43543 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
XRCC2O43543 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
XRCC2O43543 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
XRCC2O43543 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
XRCC2O43543 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
XRCC2O43543 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.52■□□□□ 0.07
XRCC2O43543 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.07
XRCC2O43543 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.52■□□□□ 0.07
XRCC2O43543 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.51■□□□□ 0.07
XRCC2O43543 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.51■□□□□ 0.07
XRCC2O43543 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
XRCC2O43543 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.51■□□□□ 0.07
XRCC2O43543 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 IGHGP-201ENST00000390555 1178 ntBASIC15.51■□□□□ 0.07
XRCC2O43543 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.51■□□□□ 0.07
XRCC2O43543 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.51■□□□□ 0.07
XRCC2O43543 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
XRCC2O43543 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.51■□□□□ 0.07
XRCC2O43543 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.51■□□□□ 0.07
XRCC2O43543 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
XRCC2O43543 AC012317.2-201ENST00000623305 2251 ntBASIC15.51■□□□□ 0.07
XRCC2O43543 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
XRCC2O43543 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
XRCC2O43543 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
XRCC2O43543 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.5■□□□□ 0.07
XRCC2O43543 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
XRCC2O43543 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
XRCC2O43543 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
XRCC2O43543 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms