Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MTDHP3-201ENST00000594186 672 ntBASIC17.99■□□□□ 0.47
SMAD6O43541 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.99■□□□□ 0.47
SMAD6O43541 AC008608.2-201ENST00000606089 416 ntBASIC17.99■□□□□ 0.47
SMAD6O43541 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.99■□□□□ 0.47
SMAD6O43541 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.99■□□□□ 0.47
SMAD6O43541 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.99■□□□□ 0.47
SMAD6O43541 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
SMAD6O43541 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.99■□□□□ 0.47
SMAD6O43541 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.99■□□□□ 0.47
SMAD6O43541 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SMAD6O43541 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMAD6O43541 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.98■□□□□ 0.47
SMAD6O43541 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
SMAD6O43541 AP005117.1-201ENST00000584346 1413 ntBASIC17.98■□□□□ 0.47
SMAD6O43541 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
SMAD6O43541 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
SMAD6O43541 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.98■□□□□ 0.47
SMAD6O43541 AC122714.2-201ENST00000502787 707 ntBASIC17.98■□□□□ 0.47
SMAD6O43541 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.98■□□□□ 0.47
SMAD6O43541 AL355877.3-201ENST00000622820 899 ntBASIC17.98■□□□□ 0.47
SMAD6O43541 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SMAD6O43541 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SMAD6O43541 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.98■□□□□ 0.47
SMAD6O43541 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SMAD6O43541 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMAD6O43541 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD6O43541 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.97■□□□□ 0.47
SMAD6O43541 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.97■□□□□ 0.47
SMAD6O43541 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SMAD6O43541 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD6O43541 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.97■□□□□ 0.47
SMAD6O43541 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SMAD6O43541 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SMAD6O43541 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.97■□□□□ 0.47
SMAD6O43541 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD6O43541 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SMAD6O43541 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.97■□□□□ 0.47
SMAD6O43541 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD6O43541 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.97■□□□□ 0.47
SMAD6O43541 MRPL3P1-201ENST00000400109 1033 ntBASIC17.97■□□□□ 0.47
SMAD6O43541 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.97■□□□□ 0.47
SMAD6O43541 FGFR3P6-201ENST00000457012 610 ntBASIC17.97■□□□□ 0.47
SMAD6O43541 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.97■□□□□ 0.47
SMAD6O43541 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD6O43541 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.97■□□□□ 0.47
SMAD6O43541 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD6O43541 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.97■□□□□ 0.47
SMAD6O43541 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.97■□□□□ 0.47
SMAD6O43541 AC116407.2-201ENST00000613639 860 ntBASIC17.97■□□□□ 0.47
SMAD6O43541 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.97■□□□□ 0.47
SMAD6O43541 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD6O43541 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD6O43541 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SMAD6O43541 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD6O43541 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD6O43541 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SMAD6O43541 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.97■□□□□ 0.47
SMAD6O43541 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SMAD6O43541 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMAD6O43541 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
SMAD6O43541 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD6O43541 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.96■□□□□ 0.47
SMAD6O43541 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SMAD6O43541 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD6O43541 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD6O43541 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD6O43541 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD6O43541 RBM17P3-201ENST00000417687 1192 ntBASIC17.96■□□□□ 0.47
SMAD6O43541 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.96■□□□□ 0.47
SMAD6O43541 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.96■□□□□ 0.47
SMAD6O43541 AP000867.4-201ENST00000641616 219 ntBASIC17.96■□□□□ 0.47
SMAD6O43541 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD6O43541 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMAD6O43541 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SMAD6O43541 AC007613.1-201ENST00000572811 2597 ntBASIC17.96■□□□□ 0.47
SMAD6O43541 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SMAD6O43541 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SMAD6O43541 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.96■□□□□ 0.47
SMAD6O43541 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms