Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.84■□□□□ 0.29
CLIC1O00299 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLIC1O00299 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLIC1O00299 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.84■□□□□ 0.29
CLIC1O00299 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLIC1O00299 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.84■□□□□ 0.29
CLIC1O00299 AC022211.2-201ENST00000585075 2527 ntBASIC16.84■□□□□ 0.29
CLIC1O00299 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.83■□□□□ 0.29
CLIC1O00299 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CLIC1O00299 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLIC1O00299 AC099398.1-201ENST00000567919 2776 ntBASIC16.83■□□□□ 0.29
CLIC1O00299 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLIC1O00299 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLIC1O00299 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIC1O00299 MMP23A-201ENST00000234610 1017 ntBASIC16.83■□□□□ 0.28
CLIC1O00299 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIC1O00299 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.83■□□□□ 0.28
CLIC1O00299 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.83■□□□□ 0.28
CLIC1O00299 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLIC1O00299 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIC1O00299 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLIC1O00299 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLIC1O00299 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLIC1O00299 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.83■□□□□ 0.28
CLIC1O00299 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLIC1O00299 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.83■□□□□ 0.28
CLIC1O00299 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.83■□□□□ 0.28
CLIC1O00299 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLIC1O00299 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CLIC1O00299 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLIC1O00299 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIC1O00299 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.83■□□□□ 0.28
CLIC1O00299 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.83■□□□□ 0.28
CLIC1O00299 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIC1O00299 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.83■□□□□ 0.28
CLIC1O00299 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIC1O00299 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CLIC1O00299 LINC01451-201ENST00000623792 534 ntBASIC16.83■□□□□ 0.28
CLIC1O00299 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.83■□□□□ 0.28
CLIC1O00299 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIC1O00299 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CLIC1O00299 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLIC1O00299 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIC1O00299 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLIC1O00299 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLIC1O00299 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.82■□□□□ 0.28
CLIC1O00299 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.82■□□□□ 0.28
CLIC1O00299 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CLIC1O00299 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.82■□□□□ 0.28
CLIC1O00299 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.82■□□□□ 0.28
CLIC1O00299 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.82■□□□□ 0.28
CLIC1O00299 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CLIC1O00299 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.82■□□□□ 0.28
CLIC1O00299 AP000523.1-201ENST00000398242 1049 ntBASIC16.82■□□□□ 0.28
CLIC1O00299 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.82■□□□□ 0.28
CLIC1O00299 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.82■□□□□ 0.28
CLIC1O00299 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.82■□□□□ 0.28
CLIC1O00299 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.82■□□□□ 0.28
CLIC1O00299 MIR4497-201ENST00000583208 89 ntBASIC16.82■□□□□ 0.28
CLIC1O00299 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.82■□□□□ 0.28
CLIC1O00299 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLIC1O00299 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CLIC1O00299 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 REXO1L11P-201ENST00000620964 1927 ntBASIC16.82■□□□□ 0.28
CLIC1O00299 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLIC1O00299 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLIC1O00299 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIC1O00299 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CLIC1O00299 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.81■□□□□ 0.28
CLIC1O00299 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.81■□□□□ 0.28
CLIC1O00299 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.81■□□□□ 0.28
CLIC1O00299 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CLIC1O00299 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.81■□□□□ 0.28
CLIC1O00299 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLIC1O00299 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms