Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
CHKB-CPT1BH3BT56 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
CHKB-CPT1BH3BT56 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
CHKB-CPT1BH3BT56 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
CHKB-CPT1BH3BT56 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
CHKB-CPT1BH3BT56 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC9.9□□□□□ -0.83
CHKB-CPT1BH3BT56 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC9.9□□□□□ -0.83
CHKB-CPT1BH3BT56 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
CHKB-CPT1BH3BT56 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
CHKB-CPT1BH3BT56 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
CHKB-CPT1BH3BT56 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.83
CHKB-CPT1BH3BT56 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 CICP13-201ENST00000422015 2789 ntBASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 MTDHP2-201ENST00000601468 714 ntBASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 AC074183.2-201ENST00000623112 922 ntBASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
CHKB-CPT1BH3BT56 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
CHKB-CPT1BH3BT56 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms