Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COLCA2A8K830 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.68□□□□□ -0.22
COLCA2A8K830 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COLCA2A8K830 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COLCA2A8K830 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COLCA2A8K830 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COLCA2A8K830 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
COLCA2A8K830 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
COLCA2A8K830 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.67□□□□□ -0.22
COLCA2A8K830 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
COLCA2A8K830 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.67□□□□□ -0.22
COLCA2A8K830 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
COLCA2A8K830 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.67□□□□□ -0.22
COLCA2A8K830 AC004987.1-201ENST00000428627 508 ntBASIC13.67□□□□□ -0.22
COLCA2A8K830 ATP5G2P3-201ENST00000429083 425 ntBASIC13.67□□□□□ -0.22
COLCA2A8K830 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 CCDC92B-201ENST00000575506 885 ntBASIC13.67□□□□□ -0.22
COLCA2A8K830 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.67□□□□□ -0.22
COLCA2A8K830 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
COLCA2A8K830 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.67□□□□□ -0.22
COLCA2A8K830 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
COLCA2A8K830 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
COLCA2A8K830 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COLCA2A8K830 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.66□□□□□ -0.22
COLCA2A8K830 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 AL137784.3-201ENST00000623858 2288 ntBASIC13.66□□□□□ -0.22
COLCA2A8K830 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.66□□□□□ -0.22
COLCA2A8K830 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.66□□□□□ -0.22
COLCA2A8K830 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.66□□□□□ -0.22
COLCA2A8K830 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
COLCA2A8K830 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
COLCA2A8K830 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
COLCA2A8K830 BX842568.3-201ENST00000418104 571 ntBASIC13.66□□□□□ -0.22
COLCA2A8K830 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.66□□□□□ -0.22
COLCA2A8K830 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC13.66□□□□□ -0.22
COLCA2A8K830 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 AC092437.1-201ENST00000624794 1048 ntBASIC13.66□□□□□ -0.22
COLCA2A8K830 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.66□□□□□ -0.22
COLCA2A8K830 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
COLCA2A8K830 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.66□□□□□ -0.22
COLCA2A8K830 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COLCA2A8K830 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.66□□□□□ -0.22
COLCA2A8K830 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COLCA2A8K830 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
COLCA2A8K830 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms