Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 AC080080.1-201ENST00000625121 2420 ntBASIC15.95■□□□□ 0.14
TVP23AA6NH52 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.95■□□□□ 0.14
TVP23AA6NH52 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.95■□□□□ 0.14
TVP23AA6NH52 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TVP23AA6NH52 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.94■□□□□ 0.14
TVP23AA6NH52 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
TVP23AA6NH52 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TVP23AA6NH52 CROCCP1-201ENST00000426910 5675 ntBASIC15.94■□□□□ 0.14
TVP23AA6NH52 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.94■□□□□ 0.14
TVP23AA6NH52 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 PVRIG2P-201ENST00000435460 978 ntBASIC15.94■□□□□ 0.14
TVP23AA6NH52 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.94■□□□□ 0.14
TVP23AA6NH52 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.94■□□□□ 0.14
TVP23AA6NH52 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TVP23AA6NH52 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TVP23AA6NH52 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TVP23AA6NH52 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TVP23AA6NH52 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TVP23AA6NH52 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TVP23AA6NH52 AC022898.2-201ENST00000616822 1312 ntBASIC15.94■□□□□ 0.14
TVP23AA6NH52 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.93■□□□□ 0.14
TVP23AA6NH52 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 PRORSD1P-202ENST00000563365 2154 ntBASIC15.93■□□□□ 0.14
TVP23AA6NH52 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.93■□□□□ 0.14
TVP23AA6NH52 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.93■□□□□ 0.14
TVP23AA6NH52 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.93■□□□□ 0.14
TVP23AA6NH52 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
TVP23AA6NH52 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
TVP23AA6NH52 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.93■□□□□ 0.14
TVP23AA6NH52 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.93■□□□□ 0.14
TVP23AA6NH52 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.93■□□□□ 0.14
TVP23AA6NH52 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TVP23AA6NH52 AC093827.2-201ENST00000512654 315 ntBASIC15.93■□□□□ 0.14
TVP23AA6NH52 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.93■□□□□ 0.14
TVP23AA6NH52 GCSHP2-201ENST00000560971 527 ntBASIC15.93■□□□□ 0.14
TVP23AA6NH52 AC141257.4-201ENST00000634557 245 ntBASIC15.93■□□□□ 0.14
TVP23AA6NH52 AC136944.6-201ENST00000634818 245 ntBASIC15.93■□□□□ 0.14
TVP23AA6NH52 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TVP23AA6NH52 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
TVP23AA6NH52 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TVP23AA6NH52 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TVP23AA6NH52 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms