Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AC112698.1-201ENST00000510299 916 ntBASIC20.37■□□□□ 0.85
CLIC4Q9Y696 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 HLA-J-201ENST00000462773 1622 ntBASIC20.37■□□□□ 0.85
CLIC4Q9Y696 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 AL138688.1-201ENST00000624851 1594 ntBASIC20.37■□□□□ 0.85
CLIC4Q9Y696 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.37■□□□□ 0.85
CLIC4Q9Y696 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 PCDHA12-202ENST00000613593 2588 ntBASIC20.36■□□□□ 0.85
CLIC4Q9Y696 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 AK4P3-201ENST00000418260 669 ntBASIC20.36■□□□□ 0.85
CLIC4Q9Y696 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 ZNF444P1-201ENST00000559497 298 ntBASIC20.36■□□□□ 0.85
CLIC4Q9Y696 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.36■□□□□ 0.85
CLIC4Q9Y696 AC116407.2-201ENST00000613639 860 ntBASIC20.36■□□□□ 0.85
CLIC4Q9Y696 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC4Q9Y696 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 AL023806.1-201ENST00000603994 1649 ntBASIC20.35■□□□□ 0.85
CLIC4Q9Y696 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 SPDYE13P-201ENST00000445314 798 ntBASIC20.35■□□□□ 0.85
CLIC4Q9Y696 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CLIC4Q9Y696 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 AL353692.3-201ENST00000407031 1396 ntBASIC20.34■□□□□ 0.85
CLIC4Q9Y696 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 DDX43P3-201ENST00000441064 443 ntBASIC20.34■□□□□ 0.85
CLIC4Q9Y696 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 RNF126P1-202ENST00000569893 925 ntBASIC20.34■□□□□ 0.85
CLIC4Q9Y696 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.34■□□□□ 0.85
CLIC4Q9Y696 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CLIC4Q9Y696 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms