Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC139713.2-201ENST00000641328 2723 ntBASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 KRT17P6-201ENST00000453795 1220 ntBASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 AP005901.3-202ENST00000581653 237 ntBASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 AC104692.2-201ENST00000603054 253 ntBASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 REXO1L9P-201ENST00000604264 2108 ntBASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 TNRC18P3-201ENST00000441896 2691 ntBASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HRH3Q9Y5N1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 AC009078.2-202ENST00000463353 338 ntBASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 AC012615.1-201ENST00000565797 1299 ntBASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 AC090616.6-201ENST00000582640 721 ntBASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.48■□□□□ 0.23
HRH3Q9Y5N1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 KRT8P10-201ENST00000450021 1447 ntBASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 AP000347.1-202ENST00000435868 847 ntBASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 KRT18P31-201ENST00000506277 1292 ntBASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 AC091304.2-201ENST00000564639 760 ntBASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 AL031008.1-201ENST00000619963 541 ntBASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 AC233702.3-201ENST00000578656 1387 ntBASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 HTR7P1-202ENST00000624664 4411 ntBASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HRH3Q9Y5N1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms