Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 AC090142.2-201ENST00000483263 416 ntBASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 HYMAI.1-201ENST00000620949 238 ntBASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 AC005786.4-201ENST00000623369 682 ntBASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 LINC00896-202ENST00000609602 2128 ntBASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS9D1Q9Y2B5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 RCN1P1-201ENST00000400413 996 ntBASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 TMPOP1-202ENST00000424642 1267 ntBASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 DUX4L26-201ENST00000489078 1255 ntBASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS9D1Q9Y2B5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.77■□□□□ 0.43
VPS9D1Q9Y2B5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VPS9D1Q9Y2B5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VPS9D1Q9Y2B5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VPS9D1Q9Y2B5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
VPS9D1Q9Y2B5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.77■□□□□ 0.43
VPS9D1Q9Y2B5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VPS9D1Q9Y2B5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.77■□□□□ 0.43
VPS9D1Q9Y2B5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.77■□□□□ 0.43
VPS9D1Q9Y2B5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VPS9D1Q9Y2B5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
VPS9D1Q9Y2B5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 AL671277.2-201ENST00000458060 996 ntBASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 AC112698.1-201ENST00000510299 916 ntBASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 RN7SL850P-201ENST00000579959 291 ntBASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 AP003400.6-201ENST00000624698 740 ntBASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS9D1Q9Y2B5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.75■□□□□ 0.43
VPS9D1Q9Y2B5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS9D1Q9Y2B5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
VPS9D1Q9Y2B5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS9D1Q9Y2B5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS9D1Q9Y2B5 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VPS9D1Q9Y2B5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms