Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 SPCS2P1-201ENST00000561636 679 ntBASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC025580.3-201ENST00000617932 1424 ntBASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC9.19□□□□□ -0.94
KRTAP4-1Q9BYQ7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 STOM-202ENST00000347359 870 ntTSL 2 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 CROCCP3-202ENST00000420820 1947 ntBASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC092364.2-202ENST00000597012 1073 ntBASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 AL805961.1-202ENST00000641562 540 ntBASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC092902.6-201ENST00000641783 218 ntBASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
KRTAP4-1Q9BYQ7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 AL096828.2-201ENST00000567259 1965 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC092919.2-201ENST00000623631 1645 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC004461.1-201ENST00000412461 403 ntBASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms