Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 PMS2P7-201ENST00000506558 1336 ntBASIC18.56■□□□□ 0.56
LRRC3Q9BY71 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 BX005266.1-201ENST00000473402 457 ntBASIC18.56■□□□□ 0.56
LRRC3Q9BY71 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 RNA5SP415-201ENST00000517246 115 ntBASIC18.56■□□□□ 0.56
LRRC3Q9BY71 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC3Q9BY71 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 AP002414.3-201ENST00000589352 1468 ntBASIC18.55■□□□□ 0.56
LRRC3Q9BY71 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 PRYP5-201ENST00000451909 266 ntBASIC18.55■□□□□ 0.56
LRRC3Q9BY71 AC105339.3-201ENST00000560043 636 ntBASIC18.55■□□□□ 0.56
LRRC3Q9BY71 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 TERC-201ENST00000602385 541 ntBASIC18.55■□□□□ 0.56
LRRC3Q9BY71 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 SIGLEC16-201ENST00000599858 1437 ntBASIC18.55■□□□□ 0.56
LRRC3Q9BY71 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC3Q9BY71 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 AC093677.2-201ENST00000600169 1863 ntBASIC18.54■□□□□ 0.56
LRRC3Q9BY71 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 AC022898.2-201ENST00000616822 1312 ntBASIC18.54■□□□□ 0.56
LRRC3Q9BY71 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 AL096828.2-201ENST00000567259 1965 ntBASIC18.54■□□□□ 0.56
LRRC3Q9BY71 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 KRT18P13-201ENST00000400056 1290 ntBASIC18.54■□□□□ 0.56
LRRC3Q9BY71 MIR940-201ENST00000401276 94 ntBASIC18.54■□□□□ 0.56
LRRC3Q9BY71 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.54■□□□□ 0.56
LRRC3Q9BY71 AL022326.1-202ENST00000641533 845 ntBASIC18.54■□□□□ 0.56
LRRC3Q9BY71 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms