Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.69■□□□□ 0.58
SMOQ99835 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.69■□□□□ 0.58
SMOQ99835 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.69■□□□□ 0.58
SMOQ99835 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.69■□□□□ 0.58
SMOQ99835 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.69■□□□□ 0.58
SMOQ99835 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
SMOQ99835 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.69■□□□□ 0.58
SMOQ99835 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SMOQ99835 AC104692.2-201ENST00000603054 253 ntBASIC18.69■□□□□ 0.58
SMOQ99835 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.69■□□□□ 0.58
SMOQ99835 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.69■□□□□ 0.58
SMOQ99835 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SMOQ99835 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SMOQ99835 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.69■□□□□ 0.58
SMOQ99835 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SMOQ99835 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMOQ99835 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.69■□□□□ 0.58
SMOQ99835 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.68■□□□□ 0.58
SMOQ99835 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMOQ99835 SIRPAP1-201ENST00000448467 1770 ntBASIC18.68■□□□□ 0.58
SMOQ99835 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMOQ99835 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMOQ99835 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMOQ99835 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.68■□□□□ 0.58
SMOQ99835 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.68■□□□□ 0.58
SMOQ99835 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMOQ99835 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMOQ99835 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SMOQ99835 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
SMOQ99835 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMOQ99835 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMOQ99835 NOC2LP1-202ENST00000452600 2235 ntBASIC18.68■□□□□ 0.58
SMOQ99835 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.68■□□□□ 0.58
SMOQ99835 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMOQ99835 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMOQ99835 ABCD1P5-201ENST00000445663 754 ntBASIC18.68■□□□□ 0.58
SMOQ99835 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.68■□□□□ 0.58
SMOQ99835 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.68■□□□□ 0.58
SMOQ99835 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMOQ99835 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMOQ99835 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMOQ99835 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMOQ99835 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SMOQ99835 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMOQ99835 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMOQ99835 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMOQ99835 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMOQ99835 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SMOQ99835 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.67■□□□□ 0.58
SMOQ99835 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SMOQ99835 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SMOQ99835 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMOQ99835 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMOQ99835 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMOQ99835 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMOQ99835 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.67■□□□□ 0.58
SMOQ99835 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.67■□□□□ 0.58
SMOQ99835 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.67■□□□□ 0.58
SMOQ99835 AC106795.1-205ENST00000512851 1056 ntBASIC18.67■□□□□ 0.58
SMOQ99835 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMOQ99835 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMOQ99835 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.67■□□□□ 0.58
SMOQ99835 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.67■□□□□ 0.58
SMOQ99835 AL121912.1-201ENST00000603683 238 ntBASIC18.67■□□□□ 0.58
SMOQ99835 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMOQ99835 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.67■□□□□ 0.58
SMOQ99835 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
SMOQ99835 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.67■□□□□ 0.58
SMOQ99835 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMOQ99835 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMOQ99835 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMOQ99835 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
SMOQ99835 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SMOQ99835 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.67■□□□□ 0.58
SMOQ99835 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SMOQ99835 AP005117.1-201ENST00000584346 1413 ntBASIC18.66■□□□□ 0.58
SMOQ99835 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SMOQ99835 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMOQ99835 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMOQ99835 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMOQ99835 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SMOQ99835 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMOQ99835 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMOQ99835 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMOQ99835 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.66■□□□□ 0.58
SMOQ99835 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms