Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPENQ96T58 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPENQ96T58 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SPENQ96T58 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
SPENQ96T58 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SPENQ96T58 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.98■□□□□ 0.15
SPENQ96T58 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SPENQ96T58 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SPENQ96T58 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SPENQ96T58 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.98■□□□□ 0.15
SPENQ96T58 AC244107.1-201ENST00000442033 332 ntBASIC15.98■□□□□ 0.15
SPENQ96T58 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.98■□□□□ 0.15
SPENQ96T58 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.98■□□□□ 0.15
SPENQ96T58 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.98■□□□□ 0.15
SPENQ96T58 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.98■□□□□ 0.15
SPENQ96T58 AL589182.2-201ENST00000619332 1049 ntBASIC15.98■□□□□ 0.15
SPENQ96T58 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
SPENQ96T58 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.98■□□□□ 0.15
SPENQ96T58 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.98■□□□□ 0.15
SPENQ96T58 IGHV3-65-201ENST00000523210 341 ntBASIC15.98■□□□□ 0.15
SPENQ96T58 SNHG9-202ENST00000564014 471 ntBASIC15.98■□□□□ 0.15
SPENQ96T58 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.98■□□□□ 0.15
SPENQ96T58 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
SPENQ96T58 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SPENQ96T58 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPENQ96T58 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SPENQ96T58 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.97■□□□□ 0.15
SPENQ96T58 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.97■□□□□ 0.15
SPENQ96T58 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.97■□□□□ 0.15
SPENQ96T58 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.97■□□□□ 0.15
SPENQ96T58 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SPENQ96T58 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SPENQ96T58 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.97■□□□□ 0.15
SPENQ96T58 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.97■□□□□ 0.15
SPENQ96T58 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.97■□□□□ 0.15
SPENQ96T58 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SPENQ96T58 AC096633.1-201ENST00000422446 749 ntBASIC15.97■□□□□ 0.15
SPENQ96T58 VN2R19P-201ENST00000442399 1052 ntBASIC15.97■□□□□ 0.15
SPENQ96T58 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.97■□□□□ 0.15
SPENQ96T58 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.97■□□□□ 0.15
SPENQ96T58 AL022326.1-202ENST00000641533 845 ntBASIC15.97■□□□□ 0.15
SPENQ96T58 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SPENQ96T58 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.97■□□□□ 0.15
SPENQ96T58 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.97■□□□□ 0.15
SPENQ96T58 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SPENQ96T58 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPENQ96T58 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.96■□□□□ 0.15
SPENQ96T58 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.96■□□□□ 0.15
SPENQ96T58 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.96■□□□□ 0.15
SPENQ96T58 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.96■□□□□ 0.15
SPENQ96T58 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SPENQ96T58 AC018445.3-201ENST00000624177 1945 ntBASIC15.96■□□□□ 0.15
SPENQ96T58 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SPENQ96T58 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SPENQ96T58 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.96■□□□□ 0.15
SPENQ96T58 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SPENQ96T58 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SPENQ96T58 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SPENQ96T58 AC009949.1-201ENST00000623048 1830 ntBASIC15.96■□□□□ 0.14
SPENQ96T58 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SPENQ96T58 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.96■□□□□ 0.14
SPENQ96T58 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.96■□□□□ 0.14
SPENQ96T58 AP000344.2-201ENST00000512987 629 ntBASIC15.96■□□□□ 0.14
SPENQ96T58 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SPENQ96T58 AC015911.4-201ENST00000588022 1070 ntBASIC15.96■□□□□ 0.14
SPENQ96T58 AC022145.2-201ENST00000598203 171 ntBASIC15.96■□□□□ 0.14
SPENQ96T58 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.96■□□□□ 0.14
SPENQ96T58 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms