Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SHDQ96IW2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.93■□□□□ 0.46
SHDQ96IW2 AC092474.2-201ENST00000424288 719 ntBASIC17.93■□□□□ 0.46
SHDQ96IW2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.93■□□□□ 0.46
SHDQ96IW2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.93■□□□□ 0.46
SHDQ96IW2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.93■□□□□ 0.46
SHDQ96IW2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.93■□□□□ 0.46
SHDQ96IW2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.93■□□□□ 0.46
SHDQ96IW2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.93■□□□□ 0.46
SHDQ96IW2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.93■□□□□ 0.46
SHDQ96IW2 AC010507.1-201ENST00000633895 436 ntBASIC17.93■□□□□ 0.46
SHDQ96IW2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SHDQ96IW2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.93■□□□□ 0.46
SHDQ96IW2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SHDQ96IW2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHDQ96IW2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
SHDQ96IW2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SHDQ96IW2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
SHDQ96IW2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.92■□□□□ 0.46
SHDQ96IW2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.92■□□□□ 0.46
SHDQ96IW2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
SHDQ96IW2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
SHDQ96IW2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SHDQ96IW2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SHDQ96IW2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.92■□□□□ 0.46
SHDQ96IW2 IGLL3P-201ENST00000412472 434 ntBASIC17.92■□□□□ 0.46
SHDQ96IW2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.92■□□□□ 0.46
SHDQ96IW2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.92■□□□□ 0.46
SHDQ96IW2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SHDQ96IW2 AC023141.13-201ENST00000604991 943 ntBASIC17.92■□□□□ 0.46
SHDQ96IW2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.92■□□□□ 0.46
SHDQ96IW2 AC132938.5-201ENST00000624980 1813 ntBASIC17.92■□□□□ 0.46
SHDQ96IW2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SHDQ96IW2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SHDQ96IW2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SHDQ96IW2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.92■□□□□ 0.46
SHDQ96IW2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHDQ96IW2 SIRPAP1-201ENST00000448467 1770 ntBASIC17.91■□□□□ 0.46
SHDQ96IW2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHDQ96IW2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHDQ96IW2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHDQ96IW2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHDQ96IW2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHDQ96IW2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.91■□□□□ 0.46
SHDQ96IW2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.91■□□□□ 0.46
SHDQ96IW2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHDQ96IW2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHDQ96IW2 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.91■□□□□ 0.46
SHDQ96IW2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHDQ96IW2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHDQ96IW2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.91■□□□□ 0.46
SHDQ96IW2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHDQ96IW2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHDQ96IW2 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.91■□□□□ 0.46
SHDQ96IW2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.91■□□□□ 0.46
SHDQ96IW2 AP002414.1-201ENST00000391405 1147 ntBASIC17.91■□□□□ 0.46
SHDQ96IW2 RHOQP3-201ENST00000437982 621 ntBASIC17.91■□□□□ 0.46
SHDQ96IW2 BCRP1-201ENST00000444246 691 ntBASIC17.91■□□□□ 0.46
SHDQ96IW2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.91■□□□□ 0.46
SHDQ96IW2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SHDQ96IW2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.91■□□□□ 0.46
SHDQ96IW2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.91■□□□□ 0.46
SHDQ96IW2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.91■□□□□ 0.46
SHDQ96IW2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms