Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 WWC2-AS2-201ENST00000578387 2183 ntBASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 BRWD1P1-201ENST00000401091 371 ntBASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 AZGP1P1-201ENST00000411909 902 ntBASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 AC015936.2-201ENST00000593177 259 ntBASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 EIF4HP1-201ENST00000453115 687 ntBASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 HIST2H2BC-201ENST00000498492 580 ntBASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AC135586.1-201ENST00000539323 574 ntBASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 DOC2GP-202ENST00000514950 1163 ntBASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 CDC14C-201ENST00000428251 1719 ntBASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AL357033.4-201ENST00000617703 1807 ntBASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 CALR4P-201ENST00000431943 946 ntBASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 ADM-202ENST00000524948 584 ntTSL 2 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC7.13□□□□□ -1.27
SYNE2Q8WXH0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms