Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
U2AF1L4Q8WU68 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2AF1L4Q8WU68 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2AF1L4Q8WU68 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.39■□□□□ 0.85
U2AF1L4Q8WU68 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.39■□□□□ 0.85
U2AF1L4Q8WU68 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 MTDHP4-201ENST00000600287 670 ntBASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 AC239800.4-201ENST00000603712 296 ntBASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
U2AF1L4Q8WU68 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 AL035633.1-201ENST00000406139 838 ntBASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 NKAPP1-205ENST00000585790 367 ntBASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
U2AF1L4Q8WU68 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 Z98044.1-201ENST00000632503 1764 ntBASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 WIZP1-201ENST00000531444 2299 ntBASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 MCCD1P2-201ENST00000423228 335 ntBASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 AL645939.2-201ENST00000427340 991 ntBASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 YBX1P5-201ENST00000509441 847 ntBASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.36■□□□□ 0.85
U2AF1L4Q8WU68 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 AC254562.1-201ENST00000417586 456 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms