Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD6Q8TD26 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 AC079328.1-201ENST00000560358 952 ntBASIC15.88■□□□□ 0.13
CHD6Q8TD26 AC016629.1-201ENST00000596579 586 ntBASIC15.88■□□□□ 0.13
CHD6Q8TD26 AC008494.3-201ENST00000606615 944 ntBASIC15.88■□□□□ 0.13
CHD6Q8TD26 MIR6775-201ENST00000617557 69 ntBASIC15.88■□□□□ 0.13
CHD6Q8TD26 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD6Q8TD26 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD6Q8TD26 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHD6Q8TD26 AC010460.3-201ENST00000511359 1579 ntBASIC15.88■□□□□ 0.13
CHD6Q8TD26 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHD6Q8TD26 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 KLF4P1-201ENST00000412782 1185 ntBASIC15.88■□□□□ 0.13
CHD6Q8TD26 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 RPS2P36-201ENST00000456516 831 ntBASIC15.88■□□□□ 0.13
CHD6Q8TD26 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD6Q8TD26 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD6Q8TD26 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD6Q8TD26 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD6Q8TD26 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHD6Q8TD26 AC140658.5-201ENST00000438532 169 ntBASIC15.88■□□□□ 0.13
CHD6Q8TD26 AC234783.1-201ENST00000441761 496 ntBASIC15.88■□□□□ 0.13
CHD6Q8TD26 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD6Q8TD26 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD6Q8TD26 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.88■□□□□ 0.13
CHD6Q8TD26 AC243960.2-201ENST00000600996 747 ntBASIC15.88■□□□□ 0.13
CHD6Q8TD26 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD6Q8TD26 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHD6Q8TD26 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHD6Q8TD26 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHD6Q8TD26 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHD6Q8TD26 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHD6Q8TD26 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHD6Q8TD26 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHD6Q8TD26 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 MIR1908-201ENST00000410394 80 ntBASIC15.87■□□□□ 0.13
CHD6Q8TD26 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 AC007389.4-201ENST00000454674 793 ntBASIC15.87■□□□□ 0.13
CHD6Q8TD26 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHD6Q8TD26 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHD6Q8TD26 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHD6Q8TD26 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHD6Q8TD26 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHD6Q8TD26 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHD6Q8TD26 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHD6Q8TD26 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.87■□□□□ 0.13
CHD6Q8TD26 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD6Q8TD26 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.86■□□□□ 0.13
CHD6Q8TD26 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHD6Q8TD26 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD6Q8TD26 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD6Q8TD26 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD6Q8TD26 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CHD6Q8TD26 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CHD6Q8TD26 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHD6Q8TD26 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD6Q8TD26 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.86■□□□□ 0.13
CHD6Q8TD26 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.86■□□□□ 0.13
CHD6Q8TD26 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.86■□□□□ 0.13
CHD6Q8TD26 SPCS2P2-201ENST00000603270 608 ntBASIC15.86■□□□□ 0.13
CHD6Q8TD26 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD6Q8TD26 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CHD6Q8TD26 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD6Q8TD26 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.86■□□□□ 0.13
CHD6Q8TD26 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.86■□□□□ 0.13
CHD6Q8TD26 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms