Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 LINC00602-201ENST00000629776 2065 ntBASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 AC087499.1-201ENST00000418141 1075 ntBASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN22Q8N7P3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN22Q8N7P3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.19
CLDN22Q8N7P3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN22Q8N7P3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CLDN22Q8N7P3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN22Q8N7P3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CLDN22Q8N7P3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN22Q8N7P3 HLA-J-201ENST00000462773 1622 ntBASIC16.27■□□□□ 0.19
CLDN22Q8N7P3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN22Q8N7P3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 HMGA1P5-201ENST00000412453 271 ntBASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 AC116407.2-201ENST00000613639 860 ntBASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 LINC01451-201ENST00000623792 534 ntBASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN22Q8N7P3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.25■□□□□ 0.19
CLDN22Q8N7P3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms