Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CROCCP3Q8IVE0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CROCCP3Q8IVE0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CROCCP3Q8IVE0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CROCCP3Q8IVE0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CROCCP3Q8IVE0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CROCCP3Q8IVE0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 AC016769.1-201ENST00000409132 1010 ntBASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 KRT18P55-202ENST00000578578 1546 ntBASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CROCCP3Q8IVE0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.18■□□□□ 0.18
CROCCP3Q8IVE0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CROCCP3Q8IVE0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP3Q8IVE0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP3Q8IVE0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP3Q8IVE0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CROCCP3Q8IVE0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP3Q8IVE0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP3Q8IVE0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CROCCP3Q8IVE0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP3Q8IVE0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP3Q8IVE0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CROCCP3Q8IVE0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.18■□□□□ 0.18
CROCCP3Q8IVE0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CROCCP3Q8IVE0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms