Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 RNA5SP415-201ENST00000517246 115 ntBASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 TERC-201ENST00000602385 541 ntBASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 AC073592.4-201ENST00000623827 446 ntBASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RNFT1Q5M7Z0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RNFT1Q5M7Z0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.02■□□□□ 0.15
RNFT1Q5M7Z0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RNFT1Q5M7Z0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RNFT1Q5M7Z0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNFT1Q5M7Z0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
RNFT1Q5M7Z0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNFT1Q5M7Z0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNFT1Q5M7Z0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 PMS2P7-201ENST00000506558 1336 ntBASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 AC105339.3-201ENST00000560043 636 ntBASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 AC034105.1-201ENST00000563488 319 ntBASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 AL022326.1-202ENST00000641533 845 ntBASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNFT1Q5M7Z0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 INIP-202ENST00000374236 874 ntTSL 2 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 SPDYE21P-201ENST00000413323 827 ntBASIC16■□□□□ 0.15
RNFT1Q5M7Z0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 AC139530.3-201ENST00000620344 690 ntBASIC16■□□□□ 0.15
RNFT1Q5M7Z0 AC073592.5-201ENST00000624854 528 ntBASIC16■□□□□ 0.15
RNFT1Q5M7Z0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNFT1Q5M7Z0 AL049757.1-201ENST00000616842 1596 ntBASIC16■□□□□ 0.15
RNFT1Q5M7Z0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms